Table 1 Distribution of the major SSR types identified from the seed BACs in B. rap a

Dinucleotide

8398 (36.21)

12-214

19.13

AT

4718 (20.34)

12-210

19.74

AG

2997 (12.92)

12-214

19.08

AC

680 (2.94)

12-74

14.94

CG

2 (0.01)

12-16

14.00

Tri-nucleotide

8722 (37.61)

12-102

13.79

AAG

2612 (11.26)

12-93

13.91

AAT

1547 (6.67)

12-102

14.00

ATC

1246 (5.43)

12-51

13.85

AAC

929 (4.00)

12-42

13.77

AGG

889 (3.83)

12-39

13.75

ACC

608 (2.62)

12-27

13.69

AGC

339 (1.46)

12-27

13.33

ACG

194 (0.83)

12-30

13.13

ACT

185 (0.80)

12-24

13.23

CCG

173 (0.71)

12-24

13.20

Tetranucleotide

3616 (15.59)

12-52

13.26

AAAT

1323 (5.70)

12-36

13.18

AAAG

483 (2.08)

12-40

13.57

AAAC

455 (2.37)

12-28

13.44

Others

1355(5.44)

12-52

13.16

Pentanucleotide

2457 (10.59)

15-45

14.56

AAAAT

685 (2.95)

15-30

14.86

AAAAC

239 (1.03)

15-30

15.84

AAAAG

171 (0.73)

15-20

15.53

Others

1362 (5.88)

15-45

14.07

Total

23192 (100.00)

12-214

14.16