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Figure 3 | BMC Genomics

Figure 3

From: Time-series clustering of gene expression in irradiated and bystander fibroblasts: an application of FBPA clustering

Figure 3

Gene ontology mapping using the PANTHER database. Genes from each of the STEM and FBPA clusters were mapped to annotations in the PANTHER database. Stacked bar-charts display the number of un-mapped (hatched bars) and mapped genes (white bars) in (A.) STEM clusters of gene response in irradiated cells; (B.) FBPA clusters of gene response in irradiated cells; (C.) STEM clusters of gene response in bystander cells and (D.) FBPA clusters of gene response in bystander cells. The percentage of genes annotated by PANTHER is indicated in the open bars (mapped genes). The cluster number is indicated on the x-axis. The total number of genes in each cluster represents the number of identifiers remaining after duplicate identifiers were removed. This adjustment is made because gene ontology methods do not recognize splice variants of genes and encoded variant proteins. In some cases this results in fewer genes than the input list from annotated microarray data.

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BMC Genomics

ISSN: 1471-2164

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