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Table 5 PANTHER gene ontology analysis on FBPA clustering of gene expression data after direct irradiation

From: Time-series clustering of gene expression in irradiated and bystander fibroblasts: an application of FBPA clustering

Biological Process

Cluster

 

1

2

3

4

Cell proliferation and differentiation

1.79 × 10-3

(14)

1.06 × 10-2

(8)

NS

NS

Signal transduction

3.41 × 10-3

(28)

3.28 × 10-3

(16)

NS

NS

Immunity and defense

6.95 × 10-3

(15)

5.34 × 10-2

(8)

NS

NS

Ligand-mediated signaling

9.81 × 10-3

(9)

NS

NS

NS

Cell surface receptor mediated signal transduction

1.11 × 10-2

(18)

2.22 × 10-3

(12)

NS

NS

Inhibition of apoptosis

2.48 × 10-2

(5)

NS

NS

NS

NF-kappaB cascade

3.96 × 10-2

(4)

NS

8.35 × 10-3

(3)

NS

Apoptosis

NS

1.04 × 10-3

(7)

NS

NS

Cell cycle control

NS

1.06 × 10-3

(7)

NS

NS

Cell cycle

NS

5.05 × 10-2

(7)

NS

NS

Granulocyte-mediated immunity

NS

NS

5.94 × 10-5

(4)

NS

Macrophage-mediated immunity

NS

NS

4.49 × 10-2

(3)

NS

Calcium mediated signaling

NS

NS

3.54 × 10-2

(3)

NS

Cell motility

NS

NS

4.53 × 10-2

(4)

NS

  1. Significant PANTHER biological processes categories, p-values are Bonferroni corrected, p-values < 0.05 are shown. The number of genes in each category is shown in parentheses. NS is Not Significant.