Table 1 HMMs built during this study
HMM | H37Rv locus | Len. | Functional category | Superfamily |
|---|---|---|---|---|
TIGR03962 | Rv0693 | 339 | radical SAM protein | PF04055 |
TIGR03965 | Rv0696 | 506 | glycosyltransferase, group 2 | PF00535 |
TIGR03967 | Rv0692 | 83 | putative mycofactocin-binding | --- |
TIGR03969 | (missed gene call) | 23 | mycofactocin | --- |
TIGR03964 | Rv0695 | 239 | creatininase family | PF02633 |
TIGR03966 | Rv0694 | 385 | FMN-dependent dehydrogenase | PF01070 |
TIGR03968 | Rv0691c | 190 | TetR family regulator | PF00440 |
TIGR03971 | Rv0687, Rv2750 | 281 | oxidoreductase, SDR family | PF00106 |
TIGR03989 | Rv0761c, Rv3086 | 371 | oxidoreductase, Zn-containing | PF00107 |
--- | --- | --- | oxidoreductase, Fe-dependent | PF00465 |