From: Deep sequencing reveals as-yet-undiscovered small RNAs in Escherichia coli
sRNA name | Size (nt) | Mean no. of Reads*a | Putative target genes*b | Â | Northern blot band size*c (nt) | Â | Ref.*d |
---|---|---|---|---|---|---|---|
 |  |  | Name | Product | Total | LM |  |
ECS003 | 116 | 357.9 | ymfL & ymfM | e14 prophage; predicted protein | ~70 | ~70 | - |
ECS008 | 75 | 53.4 | yfaS_1 | pseudogene; predicted protein | ND | ND | - |
ECS0011 | 71 | 46.5 | IS128 | small RNA (unknown function) | ~95 | ~95 | [9] |
 |  |  |  |  | ~100 | ~100 |  |
ECS0012 | 66 | 39.6 | ybhJ | predicted hydratase | smear | ~120 | - |
ECS0013 | 67 | 38.1 | rumA | 23S ribosomal RNA 5-methyluridine methyltransferase | ND | ND | - |
ECS0015 | 54 | 25.7 | nudC | NADH pyrophosphatase | ND | ND | - |
ECS0017 | 92 | 22.3 | ykgM &ykgO | predicted ribosomal protein | ~275 | ND | [11] |
ECS0018 | 90 | 21.6 | gltBDF operon | glutamate synthase & periplasmic protein | ND | ND | |
ECS0021 | 57 | 17.6 | ytfP &ytfN | conserved protein | ND | ND | - |