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Figure 3 | BMC Genomics

Figure 3

From: Perfect Hamming code with a hash table for faster genome mapping

Figure 3

1-mismatch sequences of a non-code word sequence, “CAAAA”. Idea behind finding 1-mismatch sequences of the sequence “CAAAA”. The two circles indicate the equivalence classes. The sequence “CAAAA” belongs to an equivalence class whose center is “AAAAA” that holds 3 of the 15 1-mismatch sequences. Two of the other sequences, “CAAAT” and “CAAGA”, belong to a equivalence class whose center is “CAAGT”.

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