SNP | No of SNPs | ADT design score | Average quality score of reference | SNP quality score of reference | SNP mapping quality score | Read mapping depth | Folded variant frequency |
---|---|---|---|---|---|---|---|
True-positive | 2,765 | 0.974 ± 0.050(a) | 54.9 ± 9.4 | 59.2 ± 6.6 | 34.3 ± 1.6 | 18.4 ± 9.3 | 0.39 ± 0.11 |
False-positive | 2,655 | 0.971 ± 0.053 | 54.3 ± 10.1 | 59.1 ± 7.1 | 33.7 ± 2.0 | 31.7 ± 18.0 | 0.34 ± 0.11 |
P value of t test | Â | 0.0597 | 0.0136* | 0.4553 | <0.0001** | <0.0001** | <0.0001** |