Insights into the genome structure and copy-number variation of Eimeria tenella

BMC Genomics

Table 1 Details of chromosomally-assigned genes

Chr	Gene	Reference	Gene size (bp)	GenBank accession no.	Contig aligned	Gene HAPPY marker
3	EtMIC3	[30]	3680	FJ374765	contig_00031447	NS
4	SAG 19	*	816	AJ586544	contig_00017931	S
4	SAG 19	*	816	AJ586544	contig_00031465	S
4	SAG 20	*	816	AJ586549	contig_00031465	S
5	EtMIC4	[30]	7766	AJ306453	contig_00029206	S
6 or 7	SAG 15	*	792	AJ586550	contig_00031359	S
6 or 7	SAG 18	*	807	AJ586548	contig_00031359	S
9	EtMIC2	[30]	1957	Z71755	contig_00030135	S
9	EtMIC5	[30]	3334	AJ245536	contig_00010048	NS
9 or 10	SAG 5	*	774	AJ586532	contig_00030134	S
9 or 10	SAG 7	*	762	AJ586533	contig_00030134	S
10	5 S rRNA	[31]	728	M86547	contig_00001191	NS
10	5 S rRNA	[31]	728	M86547	contig_00012636	NS
11	SAG 1	*	762	AJ586531	contig_00031646	S
11	SAG 2	*	813	AJ586540	contig_00031646	S
12	18 S-5.8 S-28S_rDNA	[31]	1286	AY779514	contig_00004986	NS
13	EtMIC1	[30]	5990	AF032905	contig_00029639	S

ISSN: 1471-2164