Table 6 Sequences of C/D box snoRNA genes in E. histolytica
From: Computational prediction and validation of C/D, H/ACA and Eh_U3 snoRNAs of Entamoeba histolytica
Me-Eh-SSU-G1296 | TGTAATGATGA GATTTTACCATGCACCACT CAGA ATTATCTACCCAAAGATAAGTTGTGTTGATTATGGTGTCTGA AC |
Me-Eh-SSU-U1024 | CACTGTGATGA AGCTTTTTATCCAATCCT CTGA ATATCGTTGATATTTATCTATGTGGATATTAATGTTGACTTCTGA GT |
Me-Eh-SSU-A83 | GAAGATGATGA CTAGACTTGGCAGTCTCCCTGTTCGCAGTTTCAT ACTGA ATAAATATGAGGATAAAGGGTTCTGA TT |
Me-Eh-SSU-G41 | AGAAATGATGA CTTGTGTGCTTAATCTTT GTTGA TTCAAAAATGATAACACTTCTTTAAAGTCTGA TT |
Me-Eh-SSU-A431 | GCAAATGAGGA AATAAAATTTGGGTAATTTACG TCTGA AATTGATGATAACCATCTGTCGTTCTGA TG |
Me-Eh-SSU-U871 | AACGATCATGA ATTTTCACCTCTCCCGTTTTTT TCTGA ATCACCCCAATTATTCCTTTTAATCCTTCTCTCGAAATGA TT |
Me-Eh-SSU-G1535 | TCGAGTGACGA TAAACCACAGACCTGTT CTGA CCTTAATGGAGATAACAGAGCTGGCTCCAATTAGCGCTGGGGCTCTGA CG |
Me-Eh-SSU-A27 | GTCAGTGATGA TCAATAAATCAGCATATA TCTGA ATAAAGTATGATGGTTTAAGACGGGTCTGA GA |
Me-Eh-SSU-A1830 | CAATATGATGA AAAAGCACCAACTCACCTCTTTA GATGA TATTCCTGATTTTGATTTTGATGAAATGATTAACCAAACTGA GG |
Me-Eh-SSU-A836 | CTTTTTGATGA ATAAACTCTTTTAATCTTTCT TTTGA ATTTTCTTTTCTCTTTTTCTTTCTTTTGAATTTTCTTCTAACTTTTCTTTTAGAGGCTTGCTGA GG |
Me-Eh-SSU-G1152 | GGTAATGATGA TAGAAAGTTTTCAGATTATTAATGAAGACATTTTCAGCCTTGT CTGA GC |
Me-Eh-SSU-G628 | TAAAATGATGA TTATAGTTTTAATACAAC ATTGA TTTAAATGAAACACACAACTTTCACTAATTTTAATAATCTAATTTTTACAATTAACTCTGA CT |
Me-Eh-SSU-A1183 | AAAAATGATGA AAAAAGAAAAAAGTCCTGGAGTTCC AACCA GGATGAATATCCATGATGATAAACTAATCTTCTCACTGA TT |
Me-Eh-SSU-A790 | AGAAGTGATGA TATATAAATTCCATGTTAGAA CTGA TATAACGTGTTGATATTTGTATAAGTCTGA TC |
Me-Eh-SSU-C1805 | GTAGATGATGA CTTATACGTCGGGCGG ACTGA AAGATTATATGTAGATTCGACGTGTCTGA TA |
Me-Eh-LSU-A928a | ACCAATGATGA TTTACATTAAACCATCTTTCG TCTGA AAAACTGATGTCAAATATGTCATAATCTGA GG |
Me-Eh-LSU-A928b | TAAGATGATGA TTTGATTCCGTGTTTCG TCTGA ATCCTGGTGAAAACTCGACAATCTTATCTGA TT |
Me-Eh-LSU-U1868 | TTCTATGATGA TATTTAATGAAAGAAGAAAAGAG TATGA ACTTAACTCAAAAAAATATAACGGTGGTGCTTTACCTAAAATCTCTTTTTTTCGTCCTGA AT |
Me-Eh-LSU-U3580a | GAATATGATGA AGTATTTTAATAAGAAATATAATAAATAATAATAGAAAGA ATGA AATAAGATAATATGAAAGAATAAGAAAAATAAAAAGATATAACTGA TG |
Me-Eh-LSU-U3580b | GAATATGATGA ATTAATTTAATAAGAAATATAATAAATAATAAAAGAAAGA ATGA AATAAGATAATATGAAATAATAAGAAAATAAAATGATATAAATGATGA TA |
Me-Eh-LSU-A785 | AGAAATGATGA TAATGTGGTCCGTGTTT CTGA ATACTGAAGAGACTATAACCACTTCTGA TT |
Me-Eh-LSU-G2958 | AGCAATGAAGA TATACGCAGTTATCCCTGT CCGA GAACTGCAAATGTGGATATGTTAACTAAGTCTGA GC |
Me-Eh-LSU-A3089 | AGAAATGATGA AATAATACTCAGCTCAC TCTGA ATATAAATGAAGAATGAGTTTCTATATGATTTCTGA TT |
Me-Eh-LSU-C2414 | GTCTGTGAGGA ATTGAAAGATAGGGACA TCTGA TATAACTGATGTTAAAAATCTTTGATTTGACTGA GA |
Me-Eh-LSU-G926 | TGAAGTGATGA TCCTTTATTTAAGTGATTAACCATGATAATCATCTTTCGGGT C TGA TT |
Me-Eh-LSU-U1018 | GAATATGATGA ACTTAATCAATATTCAAATA GCTGA ATAATATGATAAAATGAAAGTCTGTTACTGA AA |
Me-Eh-LSU-G1028 | TATGATGATGA AATGAGTCTCCGAATAATATTGAGGACAAATCTTTCGCTCCTAT CTGA TT |
Me-Eh-LSU-U1176a | TATAATGATGT ATATTTTCTTCATTAACAATTTCTTTGTTTATTTA TTGA ATTTAGTTGATAATTCATTATTAACACTACAACAACGTTTTGAATATCTTTTACTGA AG |
Me-Eh-LSU-U1176b | TATTATGATGT ATATTTTATTCATTAACAATTTCTTTGTTTATTTA TTGA ATTTAGTTGATAATTCATTATTAACACTACAACAATGGTTTGAATATCTTTTACTGA AG |
Me-Eh-LSU-U1176c | TATAATGATGT ATATTTTCATCATTAACAATTTCTTTGTTTATTTA TTGA ATTTAGTTGATAATTCATTATTAACACTACAACAACGTTTTGAATATCTTTTACTGA AG |
Me-Eh-LSU-A2333 | TGTAATGATGA GAACTTTATGAATAATAGAGAGGATTCTTATAAAAAGAAGTGGTAATATTCTCGTTTTGAAAATGTTACCAGGGATGAATAATCTCCCTTGATGATTCTTTCATAGTTACT C TGA AC |
Me-Eh-LSU-A228 | ACATATGATGA ATTTCTTGGAGAACTGAATTTAAA TTGA AGACAATTTATATTATGTTGCAAAGAACTGA TG |
Me-Eh-5.8 S-U84 | TATAATGATGA TATAAAACAATAAATTATGACTTTTCTTCAATTTTTTGATATTCA C TGA AA |
Me-Eh-5.8 S-A92 | TGTAGTGATGA TGGAAGAATTAATTCAAATTTT AATGA ATTAGTGTTATATACTGAAAGAGAGAGAATAGATGAGTATTGTGAAAGGTCTAACCTTCCTTTAAATACTACTGA AA |
EhCDOrph1 | CTAAATGATTTTCTAAATGATGA CTCTTGTGGTGGTTTTGGAGAAGACTGATTTGATGAATAAGAAGATGACCATCCTGA AGAACATTCATTTGG |
EhCDOrph2 | GACTTGATAGAATTAAGTGATGA CATGTGTTGAACAATCTCTGAGTTTTGATGACAACTTACCTTCGTCTGA TATTTCTTTTTCTTC |
EhCDOrph3 | AATTAAAAAAATAACAGTGATGA CTTTACTGCGTTATCTTAAGTAGGATTCTTTTATAGTTTCCAGTGATTTCAACTTTCACTTGAGTCTGA GTTATTCTTTTTATA |
EhCDOrph4 | TTTAATCAAATCCACAGTGATGA AATAACTTGTCTGAGAGTCATTTTTAATCATGATGGCATGTTTTTATTTCTGA GTGGGTTATTTAACT |
EhCDOrph5 | ATAATAAGATGTAAGAATGATGA AGTTTTTATTAAACTATGAATATTACATGATTACTTGATCCTCTGA CTTACATTTAATTTT |
EhCDOrph6 | TTTGAATTAGAAGACGATGATGA ATTTGAATTAGAAGACGACGAAGAAGAAGATGATGAATAAATCCTTAAATAACTGA GTGCTTATATTCAAA |
EhCDOrph7 | TTTGAATTAGAAGACGATGATGA ATTTGAATTAGAAGACGACGAAGAAGAAGATGATGAATAAATCCTTAAATAACTGA GTGCTTATATTCAAA |