| Plant material | Microarrays | Genes5 |
---|
| Tissue type | Sp1 | Source sampling2 | Genotype3 | Slide | Imaging4 | Total | Unique | Non-annotated |
---|
1 | Embryogenic cells | Pgl | a, a | 1 | 6 | SQ | 10,066 | 100 | 2,456 |
2 | Vegetative buds | Pgl | b, c | 2 | 10 | SQ | 12,361 | 128 | 3,216 |
3 | Xylem (Mature) | Pgl | d, d | 60 | 60 | SQ | 14,686 | 176 | 4,232 |
4 | Xylem (juvenile) | Pgl | e, f | 30 | 20 | SQ | 13,807 | 56 | 3,701 |
5 | Phelloderm | Pgl | e, f | 30 | 20 | SQ | 15,803 | 214 | 4,391 |
6 | Young needles | Pgl | e, f | 30 | 10 | SQ | 12,819 | 167 | 3,025 |
7 | Megagametophytes | Pgl | g, c | 3 | 3 | PA | 17,056 | 1,111 | 5,205 |
8 | Adventitious roots | Pab | h, c | 8 | 20 | PA | 15,718 | 393 | 4,696 |
| | | | | Total detected | 21,241 | 2,345 | |
| | | | | Not detected | 2,612 | | |
- 1 Pgl: Picea glauca (White spruce); Pab: Picea abies (Norway spruce).
- 2 The source of materials and the sampling method are from the following studies: a, [43]; b, [37]; c, this paper, see methods; d, [23]; e, O-P seedlot, this paper see methods; f, [22]; g, C2856 parent from [38]; h, [44].
- 3 Total numbers of genotypes analyzed (either individually or in pools).
- 4 Microarray Scanner and Image Processing: SQ, ScanArray Express (Perkin Elmer, Waltham MA, USA) and QuantArray v3.0 (Packard BioChip Technologies, Billerica, MA, USA); PA, PowerScanner (Tecan Group Ltd., Männedorf, Switzerland) and ArrayPro Analyser v6.3 (Media Cybernetics, Bethesda, MD, USA).
- 5 Total: number of genes above background (see methods); Unique: genes detected only in one tissue.