Coding sequence a | Gene | Predicted function | Fold change b |
---|---|---|---|
Disulphide stress related genes | |||
cg3405◊* | NADPH:quinone reductase | 13.27 | |
cg2538 | Alkanal monooxygenase (FMN-linked) | 12.3 | |
cg2838 | Putative dithiol-disulfide isomerase | 11.71 | |
cg3236 | msrA | Protein-methionine-S-oxide reductase | 6.59 |
cg2194 | mtr | Putative NADPH-dependent mycothiol reductase | 4.92 |
cg1709▫- | mshC | Putative 1-D-myo-inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside—L-cysteine ligase | 4.47 |
cg3299 | trxB1 | Thioredoxin (TRX) | 3.73 |
cg2078 | msrB | Peptide methionine sulfoxide reductase | 3.61 |
cg3422○* | trxB | Thioredoxin reductase | 3.53 |
cg3423○ | trxC | Thioredoxin | 2.97 |
cg2661 | Putative dithiol-disulfide isomerase | 2.68 | |
cg3344 | Putative nitroreductase | 2.66 | |
cg1127▪ | mca | Putative mycothiol S-conjugate amidase | 2.46 |
cg2214 | Putative Fe-S-cluster redox enzyme | 2.27 | |
cg0497□* | mca | Glutamyl-tRNA reductase | 2.07 |
cg1765 | sufR | Transcriptional repressor of suf operon | 1.75 |
cg1553 | qor2 | quinone oxidoreductase involved in disulfide stress response | 1.60 |
cg1375 | Putative thioredoxin | 1.58 | |
1 | |||
Heat stress-related genes | |||
cg2515 | dnaJ2 | Chaperone, contains C-terminal Zn-finger domain | 1.85 |
cg2644: | clpP2 | Endopeptidase Clp, proteolytic subunit | 1.68 |
cg3079●* | clpB | Putative ATP-dependent protease (heat-shock protein) | 1.57 |
cg2645:* | clpP1 | Endopeptidase Clp, proteolytic subunit | 1.57 |
SOS and DNA repair genes | |||
cg1555 | uvrD3 | DNA/RNA helicase, superfamily I | 3.78 |
cg1560 | uvrA | Excinuclease ABC, ATPase subunit A | 2.23 |
cg0184^* | Putative RNA-binding protein | 1.95 | |
cg0185^ | Putative glyoxalase | 1.91 | |
cg0186^ | Putative methylated-DNA--protein-cysteine methyltransferase | 1.91 | |
cg1795 | uvrC | Excinuclease subunit C | 1.53 |
Proteasome components | |||
cg1688°:: | pafA2 | Putative proteasome component | 2.71 |
cg1689°::* | pup | prokaryotic ubiquitin-like protein | 2.48 |
cg0998 | Trypsin-like serine protease | 1.54 | |
Genes with other function | |||
cg3407◊ | Putative membrane protein | 6.41 | |
cg2106 | Conserved hypothetical protein | 6.19 | |
cg0617†* | Hypothetical protein | 4.20 | |
cg1288 | Putative multidrug efflux permease, MFS-type | 3.94 | |
cg1432 | ilvD | Dihydroxy-acid dehydratase | 3.84 |
cg1398‡ | Conserved hypothetical protein | 3.78 | |
cg0614† | Hypothetical protein | 3.71 | |
cg0616† | fdhD | Putative formate dehydrogenase, FdhD-family | 3.71 |
cg1397‡* | trmU | tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase | 3.71 |
cg2423 | lipA | Lipoyl synthetase | 3.34 |
cg0378 | Putative phage-associated protein | 2.93 | |
cg2411 | Conserved hypothetical protein, HesB/YadR/YfhF family | 2.81 | |
cg1799·* | ribC | Riboflavin synthase, alpha chain | 2.73 |
cg2247 | Hypothetical protein | 2.41 | |
cg1282 | Conserved hypothetical protein | 2.35 | |
cg2127 | Hypothetical protein | 2.35 | |
cg3424○ | cwlM | N-Acetylmuramoyl-L-alanine amidase | 2.33 |
cg1798· | ribA | Putative GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphatesynthase | 2.22 |
cg2835 | Putative acetyltransferase | 2.17 | |
cg1281 | ABC-type putative multidrug transporter, ATPase and permease subunit | 2.16 | |
cg1687°:: | Putative transcriptional regulatory protein | 2.13 | |
cg1797· | ribH | Riboflavin synthase, beta chain | 2.10 |
cg1779 | opcA | Glucose-6-phosphate 1-dehydrogenase subunit | 2.06 |
cg2762 | murI | Glutamate racemase | 2.03 |
cg3078● | Hypothetical protein | 1.97 | |
cg1411° | rbsA | ABC-type ribose transporter, ATPase subunit (TC 3.A.1.2.1) | 1.92 |
cg2636 | catA | Catechol 1,2-dioxygenase | 1.88 |
cg1780 | pgl | 6-Phosphogluconolactonase | 1.87 |
cg1413° | rbsB | ABC-type ribose transporter, substrate-binding lipoprotein (TC 3.A.1.2.1) | 1.85 |
cg0498□ | hemC | Porphobilinogen deaminase | 1.84 |
cg2665 | Hypothetical protein | 1.82 | |
cg2181†* | ABC-type putative dipeptide/oligopeptide transporter, substrate-binding lipoprotein | 1.80 | |
cg1128▪ | Hypothetical protein, similar to ribosomal protein S2 | 1.79 | |
cg1139 | Allophanate hydrolase subunit 2 | 1.75 | |
cg1708- | Conserved hypothetical protein | 1.75 | |
cg2560 | aceA | Isocitrate lyase | 1.72 |
cg2183† | ABC-type putative dipeptide/oligopeptide transporter, permease subunit | 1.71 | |
cg2434 | Putative monooxygenase, luciferase | 1.68 | |
cg0380 | Hypothetical protein | 1.67 | |
cg0043 | ABC-type putative manganese/zinc transporter, ATPase subunit | 1.65 | |
cg0228 | Two-component system, sensory histidine kinase, putative pseudogene | 1.65 | |
cg1412° | rbsC | ABC-type ribose transporter, permease subunit (TC 3.A.1.2.1) | 1.65 |
cg1778 | zwf | Glucose-6-phosphate 1-dehydrogenase | 1.65 |
cg1686° | Putative transcriptional regulatory protein | 1.61 | |
cg1482 | Putative Zn-dependent hydrolase | 1.61 | |
cg2514 | Conserved hypothetical protein | 1.59 | |
cg2206 | ispG | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | 1.58 |
cg2546 | Putative secondary C4-dicarboxylate transporter, tripartite ATP-independent transporter (TRAP-T) family | 1.58 | |
cg0699 | guaB2 | IMP dehydrogenase | 1.56 |
cg2184 | ABC-type putative dipeptide/oligopeptide transporter, ATPase subunit | 1.56 | |
cg3077● | Putative membrane protein | 1.56 | |
cg1410°* | rbsR | Transcriptional repressor of ribose importer RbsACBD, LacI-family | 1.54 |
cg1464 | Putative transcriptional regulator, HTH_3-family | 1.52 |