Motifs | Number | Percentage (%) | Total length (bp) | Average length (bp) |
---|---|---|---|---|
Mononucletide | 163621 | 69.97 | 1952399 | 11.93 |
 A | 158142 | 67.63 | 1872884 | 11.84 |
 C | 5479 | 2.34 | 79515 | 14.51 |
Dinucleotide | 55336 | 23.66 | 968946 | 17.51 |
 AT | 33315 | 14.25 | 596070 | 17.89 |
 AG | 18593 | 7.95 | 322438 | 17.34 |
 AC | 3411 | 1.46 | 50220 | 14.72 |
 CG | 17 | 0.01 | 218 | 12.82 |
Trinucleotide | 13080 | 5.59 | 254598 | 19.46 |
 AAG | 4281 | 1.83 | 80493 | 18.80 |
 AAT | 2535 | 1.08 | 63240 | 24.95 |
 AGG | 1434 | 0.61 | 26880 | 18.74 |
 AAC | 1313 | 0.56 | 22029 | 16.78 |
 AGT | 1062 | 0.45 | 19302 | 18.18 |
 ACT | 1004 | 0.43 | 18582 | 18.51 |
 ACC | 795 | 0.34 | 13245 | 16.66 |
 AGC | 271 | 0.12 | 4581 | 16.90 |
 ACG | 225 | 0.10 | 3708 | 16.48 |
 CCG | 160 | 0.07 | 2538 | 15.86 |
Tetranucleotide | 1131 | 0.48 | 26960 | 23.84 |
 AAAT | 404 | 0.17 | 8916 | 22.07 |
 AAAG | 152 | 0.07 | 4060 | 26.71 |
 AATT | 110 | 0.05 | 2692 | 24.47 |
 AAAC | 94 | 0.04 | 2108 | 22.43 |
 Others | 371 | 0.16 | 9184 | 24.75 |
Pentanucleotide | 365 | 0.16 | 14380 | 39.40 |
 AAAAT | 126 | 0.05 | 7710 | 61.19 |
 AAAAC | 31 | 0.01 | 830 | 26.77 |
 AAAAG | 25 | 0.01 | 690 | 27.60 |
 AAACC | 24 | 0.01 | 610 | 25.42 |
 Others | 159 | 0.07 | 4540 | 28.55 |
Hexanucleotide | 311 | 0.13 | 11772 | 37.85 |
 AGAGGG | 23 | 0.01 | 1146 | 49.83 |
 AAAAAC | 16 | 0.01 | 510 | 31.88 |
 AAGCCC | 12 | 0.01 | 468 | 39.00 |
 AAAAAT | 12 | 0.01 | 636 | 53.00 |
 Others | 248 | 0.10 | 9012 | 36.34 |
 Total | 233844 | 100 | 3229055 | 13.81 |