Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote

Table 3 Assessment of transcriptome assembly

	Number	Percentage
Total previous full-length cDNAs	1,087
Completely assembled with same ORFs	1,011	93.0%
Partially assembled	45	4.1%
Poorly assembled	31	2.9%

A total of 1,087 previously identified catfish full-length cDNAs were used to compare with the assembled transcripts in this study to assess the transcriptome assembly.

ISSN: 1471-2164