Skip to main content
Figure 2 | BMC Genomics

Figure 2

From: Genome wide SNP discovery in flax through next generation sequencing of reduced representation libraries

Figure 2

Mapping characteristics of Illumina reads of eight flax genotypes in 0.5 Mbp bins of the concatenated CDC Bethune whole genome shotgun sequence assembly. (A) Heat map distribution of mapping coverage percentage (MCP) and (B) average mapped read depth (MRD). The heat maps were generated using an in-house Java based program. (C) Relationship of sequence genome coverage (X; genome equivalent) with MCP and average MRD (BT-CDC Bethune, MB-Macbeth, SP-SP2047, UG-UGG5-5, DL-Double Low, CT-Crepitam Tabor, G11-G-1186/94, AT-Atlas).

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us