From: Phylogenetic patterns of emergence of new genes support a model of frequent de novoevolution
ENSMUS IDs | Phylostratum | Comment | ||||
---|---|---|---|---|---|---|
Gene | Newer protein | Older protein | Gene name | Overprint | Original | Â |
G00000029642 | P00000106186 | P00000058355 | Polr1d | 5 | 2 | Same start as main gene, but acquired additional exons |
G00000030970 | P00000127123 | P00000033269 | Ctbp2 | 12 | 1 | Same start as main gene, but acquired an additional internal exon |
G00000035504 | P00000100994 | P00000100995 | Reep6 | 17 | 2 | New initiation codon creates second reading frame |
G00000089756 | P00000104646 | P00000104577 | Gm8898 | 18 | 2 | Same start, but new splice variant; paralog of Gm4723 |
G00000078898 | P00000104676 | P00000104675 | Gm4723 | 18 | 2 | Same start, but new splice variant; paralog of Gm8898 |
G00000038227 | P00000133896 | P00000046939 | Hoxa9 | 18 | 2 | New starting exon initiates a separate reading frame |
G00000067786 | P00000134415 | P00000085836 | Nnat | 18 | 16 | Same start, alternative splicing leads to new reading frames |
G00000044405 | P00000105110 | P00000051732 | Adig | 20 | 16 | Same start as main gene, but acquired an additional internal exon |
G00000025144 | P00000101761 | P00000026137 | Stra13 | 20 | 2 | Gain of alternative second exon induces a shift from the older frame |
G00000033720 | P00000109417 | P00000041872 | Sfxn5 | 20 | 2 | Alternative first exon and last exons, common second exon |
G00000063235 | P00000107087 | P00000077036 | Ptpmt1 | 20 | 1 | Alternative transcription start site and start codon |
G00000044303 | P00000030237 | P00000061847 | Cdkn2aa | 16 | 1 | New starting exon initiates a separate reading frame. Also known as Arf, Pctr1, MTS1, Ink4a |
G00000027523 | P00000104716 | P00000085184 | Gnasb | 18 | 2 | New initiation codon creates second reading frame. Also known as Nesp, GPSA |