Table 7 Transcriptome assembly and annotation metrics from herbivorous insects included in glycoside hydrolase and Pfam comparisons
Genus | Number of Unique Reads and Isotigs | Number of Insect Reads and Isotigs | Number of Reads and Isotigs classified as ncRNA | Number of Reads and Isotigs with Gene Ontology Assignments* | Number of Reads and Isotigs with KEGG Assignments* | Number of Reads and Isotigs with Pfam Domains* |
|---|---|---|---|---|---|---|
Coptotermes | 33,662 | 5,728 | 91 | 2,187 | 592 | 2691 |
Reticulitermes | 8,616 | 2,112 | 312 | 1,141 | 352 | 1,665 |
Agrilus | 29,773 | 8,614 | 1,119 | 4,069 | 1,230 | 4,715 |
Anoplophora | 20,587 | 9,109 | 78 | 4,331 | 1,630 | 4,591 |
Chrysomela | 48,675 | 14,606 | 48 | 6,004 | 1,925 | 7,888 |
Gastrophysa | 45,675 | 14,783 | 66 | 5,720 | 1,711 | 10,532 |
Leptinotarsa | 81,335 | 20,037 | 57 | 4,385 | 1,669 | 5,764 |
Callosobruchus | 68,336 | 20,880 | 84 | 7,047 | 2,045 | 13,703 |
Dendroctonous | 4,328 | 2,876 | 130 | 1,499 | 423 | 2,240 |
Sitophilus | 56,592 | 17,846 | 96 | 6,278 | 1,869 | 11,796 |
Mayetolia | 3,895 | 2,225 | 536 | 1,409 | 441 | 1,834 |
Peregrinus | 19,297 | 8,740 | 55 | 3,957 | 1,014 | 6,483 |
Apis | 42,370 | 17,008 | 179 | 5,602 | 1,882 | 7,110 |
Ostrinia | 2,713 | 1,670 | 84 | 2,394 | 219 | 1,419 |
Manduca | 82,488 | 13,638 | 179 | 6,210 | 1,957 | 7,439 |