From: A platform independent RNA-Seq protocol for the detection of transcriptome complexity
sample (sequencing technology) | n.passed filterreads | average read length (nt) | n.of reads with ≥ 1 tag | n. of reads after the tags elimination ≥ 40nt | n.of reads after the tags elimination ≥ 100nt | n.of reads after duplicates elimination ≥ 40nt |
---|---|---|---|---|---|---|
OST-78 (454) | 504,879 | 312 | 65,514 | 538,312 | 446,877 | - |
OST-83 (454) | 551,068 | 336 | 56,494 | 582,551 | 505,315 | - |
OST-78 [1] (MiSeq) | 1,595,032 | 207 | 208,880 | 1,716,457 | 1,381,413 | 421,927 |
OST-78 [2] (MiSeq) | 1,595,032 | 208 | 177,262 | 1,786,470 | 1,377,657 | 390,845 |
OST-83 [1] (MiSeq) | 2,121,777 | 214 | 222,766 | 2,363,988 | 1,887,111 | 640,919 |
OST-83 [2] (MiSeq) | 2,121,777 | 214 | 195,037 | 2,331,186 | 1,882,368 | 605,078 |