Figure 1

Nucleotide analysis of the top-scoring target region in the ChIP-Seq experiment showing the presence of an NtcA-binding site. A) Location of the target region (in black) with respect to the adjacent ORFs and in the context of the transcriptomic data from Flaherty et al.[13]. B) Zoomed image of the midpoint of the target region (circled A), the putative TSP (G), and the putative NtcA-binding sequence (GTGTGTCTTGATAC) located 22 nucleotides from a putative -10 box (TATGCT) (CLC Sequence Viewer). Horizontal gray lines indicate transcription [13].