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Table 2 Summary of Hevea brasiliensis transcriptome sequencing

From: De novo transcriptome analysis of Hevea brasiliensistissues by RNA-seq and screening for molecular markers

Sample

Number of reads

Aligned reads

Number of contigs

Average contig size

N50

Q40 plus*

RRIM600 and RRIM600 OPS

523,371

80.69%

19,708

936

969

94.07%

  1. * indicates the bases with a Phred-like consensus quality score of at least 40 (meaning a 1:10000 chance of the base being wrong).
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BMC Genomics

ISSN: 1471-2164

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