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Figure 3 | BMC Genomics

Figure 3

From: T-KDE: a method for genome-wide identification of constitutive protein binding sites from multiple ChIP-seq data sets

Figure 3

Performance of T-KDE and binning. (A) Proportion of T-KDE-declared constitutive CTCF binding sites whose distance from the nearest motif-based constitutive CTCF binding site on 23 chromosomes is less than distance d plotted as a function of d for various bandwidths. (B) Proportion of binning-declared constitutive CTCF binding sites whose distance from nearest motif-based constitutive CTCF binding site on 23 chromosomes is less than distance d plotted as a function of d for various bin widths.

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BMC Genomics

ISSN: 1471-2164

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