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Table 2 Expanded and lineage-specific protein families in Endocarpon pusillum

From: Genome characteristics reveal the impact of lichenization on lichen-forming fungus Endocarpon pusillum Hedwig (Verrucariales, Ascomycota)

Protein family ID

Number of proteins in E. pusillum

p-value

HMMPfam description

group10696

20

0

Hypothetical protein CIMG_07368

group10024

15

0

Ankyrin and HET domain-containing protein

group14580

14

0

Ankyrin repeat

group10771

13

0

P-loop containing nucleoside triphosphate hydrolases

group11690

13

0

MFS general substrate transporter

group10071

11

0

Putative transposase

group10011

10

0

Hypothetical protein NECHADRAFT_87861

group14903

8

0

Heterokaryon incompatibility protein

group17019

7

1E-07

DNA/RNA polymerases

group10674

10

3E-07

Magnesium transport protein CorA, transmembrane region

group10674

10

3E-07

Hypothetical protein AN9301.2

group10038

8

5E-07

Hypothetical protein SS1G_06795

group10340

8

5E-07

Conserved hypothetical protein

group15154

6

5E-07

Hypothetical protein CHGG_10108

group16626

6

5E-07

Hypothetical protein

group18347

6

5E-07

Hypothetical protein

group10002

9

2.4E-06

Ribonuclease H-like

group10015

9

2.4E-06

Ankyrin repeat

group10097

7

4.6E-06

Ankyrin repeat

group10201

7

4.6E-06

ARM repeat

group10224

7

4.6E-06

Heterokaryon incompatibility protein

group10843

7

4.6E-06

Predicted protein

group11854

7

4.6E-06

Cytochrome P450

group10000

11

0.000001

P-loop containing nucleoside triphosphate hydrolases

group10705

5

0.000005

Hypothetical protein

group11683

5

0.000005

Dimeric alpha + beta barrel

group11909

5

0.000005

Unnamed protein product

group13886

5

0.000005

Ankyrin repeat

group15448

5

0.000005

FabD/lysophospholipase-like

group16624

5

0.000005

Protein kinase-like (PK-like)

group16962

5

0.000005

Hypothetical protein NFIA_004500

group17139

5

0.000005

Cytochrome P450

group18335

5

0.000005

Predicted protein

group18344

5

0.000005

Conserved hypothetical protein

group19016

5

0.000005

Hypothetical protein

group19022

5

0.000005

Hypothetical protein

group10704

8

1.78E-05

Conserved hypothetical protein

group10239

6

3.81E-05

P-loop containing nucleoside triphosphate hydrolases

group10495

6

3.81E-05

Unnamed protein product

group10677

6

3.81E-05

Unnamed protein product

group11482

6

3.81E-05

Predicted protein

group11606

6

3.81E-05

Hypothetical protein AOR_1_1448144

group15933

6

3.81E-05

Purine and uridine phosphorylases

group16361

6

3.81E-05

Hypothetical protein SS1G_13793

group16513

6

3.81E-05

Conserved hypothetical protein

group17376

6

3.81E-05

Hypothetical protein

group10014

9

4.84E-05

POZ domain

group10175

9

4.84E-05

Hypothetical protein CIMG_05613

group10238

4

4.94E-05

WD40 repeat-like

group11337

4

4.94E-05

TPR-like

group12140

4

4.94E-05

WD40 repeat-like

group16268

4

4.94E-05

Hypothetical protein MGYG_01629

group17166

4

4.94E-05

Predicted protein

group17167

4

4.94E-05

Alpha/beta-Hydrolases

group17374

4

4.94E-05

Hypothetical protein FRAAL5044

group17553

4

4.94E-05

Protein kinase-like (PK-like)

group17955

4

4.94E-05

Conserved hypothetical protein

group18350

4

4.94E-05

Hypothetical protein CHGG_08502

group19010

4

4.94E-05

NTF2-like

Lineage-specific protein families

Protein family ID

Number of proteins in E. pusillum

p-value

Pfam description

group19669

4

4.94E-05

Ribonuclease H-like

group19844

4

4.94E-05

Transposase

group19847

4

4.94E-05

Hypothetical protein

group19848

4

4.94E-05

Hypothetical protein

group19850

4

4.94E-05

Protein kinase-like (PK-like)

group19853

4

4.94E-05

Ankyrin repeat