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Table 2 PCC between Hsps and heat responsive probe-sets in rice in response to abiotic stresses

From: Genome-wide identification of heat shock proteins (Hsps) and Hsp interactors in rice: Hsp70s as a case study

Uniprot

MSU-ID

Family

|PCC| with UP*

|PCC| with DP*

Average

Q6Z7B0

LOC_Os02g02410

Hsp70

0.8035

0.8622

0.8328

Q75GT3

LOC_Os03g31300

Hsp100/ClpB

0.8019

0.8614

0.8316

Q943E6

LOC_Os01g04380

sHsp

0.8016

0.8546

0.8281

Q10SR3

LOC_Os03g02260

Hsp70

0.7914

0.8579

0.8246

Q6K7E9

LOC_Os02g54140

sHsp

0.7871

0.8610

0.8241

Q0E3C8

LOC_Os02g08490

Hsp100/ClpB

0.7817

0.8551

0.8184

Q84J50

LOC_Os03g16040

sHsp

0.7956

0.8404

0.8180

Q10PW8

LOC_Os03g11910

Hsp70

0.7956

0.8401

0.8179

Q5Z9N8

LOC_Os06g50300

Hsp90

0.7755

0.8410

0.8082

Q6F2Y7

LOC_Os05g44340

Hsp100/ClpB

0.7590

0.8367

0.7978

Q8H903

LOC_Os10g32550

Hsp60

0.7810

0.8117

0.7963

P27777

LOC_Os01g04370

sHsp

0.7770

0.8101

0.7936

Q0E4A8

LOC_Os02g03570

sHsp

0.7541

0.8209

0.7875

Q67X83

LOC_Os06g11610

sHsp

0.7316

0.8028

0.7672

B7EZJ7

LOC_Os02g10710

sHsp

0.7341

0.7828

0.7585

Q6Z7V2

LOC_Os02g52150

sHsp

0.7264

0.7902

0.7583

Q9AQZ5

LOC_Os01g08560

Hsp70

0.7181

0.7938

0.7560

Q2QV45

LOC_Os12g14070

Hsp70

0.7471

0.7504

0.7488

Q84Q72

LOC_Os03g16030

sHsp

0.7313

0.7655

0.7484

Q10RW9

LOC_Os03g04970

Hsp60

0.7375

0.7393

0.7384

Q9LWT6

LOC_Os06g02380

Hsp60

0.7329

0.7338

0.7333

Q84Q77

LOC_Os03g15960

sHsp

0.6815

0.7351

0.7083

Q943K7

LOC_Os05g38530

Hsp70

0.6785

0.7363

0.7074

P31673

LOC_Os03g16020

sHsp

0.6464

0.6942

0.6703

Q0J4P2

LOC_Os08g39140

Hsp90

0.6045

0.6558

0.6301

Q7EZ57

LOC_Os07g33350

sHsp

0.6393

0.5777

0.6085

Q69QQ6

LOC_Os09g30418

Hsp90

0.5857

0.6165

0.6011

\

Global |PCC|

CI_upper**

\

\

0.5842

\

Global |PCC|

CI_lower**

\

\

0.5648

P0C031

LOC_Os06g44080

Ubq5/control

0.5547

0.4631

0.5089

Q943E9

LOC_Os01g04350

sHsp

0.4685

0.5228

0.4957

Q7X9A7

LOC_Os03g64210

Hsp60

0.5258

0.4232

0.4745

Q6AUW3

LOC_Os05g42120

sHsp

0.4727

0.3719

0.4223

Q10NA9

LOC_Os03g16860

Hsp70

0.4162

0.3292

0.3727

  1. *UP: Probe-sets that were significantly up-regulated by heat treatments; DP: Probe-sets that were significantly down-regulated by heat treatments.
  2. **CI_upper: upper bound of bootstrapped 95% confidence interval for global pairwise |PCC|; CI_lower: lower bound of bootstrapped 95% confidence interval.
  3. Controls shown in BOLD.
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BMC Genomics

ISSN: 1471-2164

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