Figure 4

Comparative diagram of the P. ananatis pan-genome against members of the genomes of representative members of the family Enterobacteriaceae showing that AAB-, IAB- and PAB-specific CDSs are mainly restricted to regions of lower conservation among the Enterobacteriaceae . The P. ananatis pan-genome CDS set was compared by RBBH approach against the CDS sets of 54 members of the family Enterobacteriaceae, which are listed in Additional file 7: Table S6. Orthologs were considered as those translated CDSs sharing >50% amino acid identity and >70% sequence coverage across the query and hit sequences. Orthologs in each of the enterobacterial comparators are indicated by black arrows The outer circle shows the locations of PAB- (dark green), non-enterobacterial PAB- (light green), IAB- (maroon), AAB- (red), Pantoea- (blue) and P. ananatis-specific (yellow) CDSs on the P. ananatis pan-genome.