Table 3 New miRNAs identified
miRNA ID | Length of hairpin precursor | MFE | MFEIa | Randfold p-value | Sequence | sRNA length | RPM - CT | RPM - Hs |
|---|---|---|---|---|---|---|---|---|
Zma_miR_Seq01 | 169 | -42.5 | 0.61 | 0.029703 | AAAATTTAGAGGACGTTGCTGGAG | 24 | - | 10.34 |
Zma_miR_Seq02 | 141 | -84.8 | 1.15 | 0.009901 | AAACCGTCGGAGATAGCTTATGTC | 24 | - | 8.86 |
Zma_miR_Seq03 | 128 | -76.7 | 1.08 | 0.009901 | AACCTATGTCCGACGGTTTTAGGC | 24 | - | 7.39 |
Zma_miR_Seq04 | 79 | -26.4 | 0.52 | 0.09901 | ACGTCTATGGTTAGATCACGCGGC | 24 | - | 8.86 |
Zma_miR_Seq05 | 75 | -23.9 | 0.70 | 0.049505 | ATAACTGTAGTGCATTAAAGCGGG | 24 | 4.07 | 7.39 |
Zma_miR_Seq06 | 173 | -60.52 | 0.85 | 0.009901 | ATCCATATGGACTGGGAGGAAAGC | 24 | - | 44.32 |
Zma_miR_Seq07a | 104 | -58.3 | 0.80 | 0.009901 | CCCGCCGGCGAGCGCTTTCCT | 21 | - | 13.30 |
Zma_miR_Seq07b | 104 | -58.3 | 0.80 | 0.019802 | CCCGCCGGCGAGCGCTTTCCT | 21 | - | 13.30 |
Zma_miR_Seq08 | 170 | -91.5 | 0.92 | 0.009901 | CGGCGGGGGCGAACTGAGAAC | 21 | 21.70 | 143.31 |
Zma_miR_Seq09a | 161 | -64.2 | 0.84 | 0.009901 | CGTGGTATTGTTTCGGCTCATG | 22 | 11.53 | 125.58 |
Zma_miR_Seq09b | 123 | -57.4 | 0.94 | 0.009901 | CGTGGTATTGTTTCGGCTCATG | 22 | 11.53 | 125.58 |
Zma_miR_Seq09c | 123 | -57.4 | 0.94 | 0.009901 | CGTGGTATTGTTTCGGCTCATG | 22 | 11.53 | 125.58 |
Zma_miR_Seq10 | 114 | -31.3 | 0.68 | 0.059406 | TCCTTGTTGGACAGATAAAGGAGC | 24 | - | 7.39 |
Zma_miR_Seq11 | 85 | -45.5 | 1.17 | 0.009901 | TTGTTGGTCTATTCGGGTTTTCGA | 24 | - | 7.39 |
Zma_miR_Seq12 | 143 | -57.8 | 0.81 | 0.009901 | CATGAACCGAGCGAGCTAGCGAGC | 24 | 14.92 | - |
Zma_miR_Seq13 | 232 | -110.7 | 0.75 | 0.009901 | GGCGGACTGGGAACACATGGG | 21 | 7.46 | - |
Zma_miR_Seq14 | 152 | -103.3 | 1.45 | 0.009901 | TTGGGAGCCACAAAACTGAAG | 21 | 3.39 | - |
Zma_miR_Seq15 | 179 | -84 | 1.00 | 0.009901 | TTTTGTTGGTGGTCATTTAACC | 22 | 14.24 | - |