Table 1 Genome assembly statistics of the three strains
From: Comparative genomics of Cylindrospermopsis raciborskii strains with differential toxicities
Genome characteristics | C. raciborskii strain | ||
|---|---|---|---|
CS-506 | CS-509 | CS-505 | |
Size (Mb) | 4.1 | 4.0 | 3.9 |
G + C content (%) | 41.1 | 40.7 | 40.8 |
N50 (bp) | 25,000 | 56,411 | NA |
N90 (bp) | 412 | 268 | NA |
Largest scaffold (bp) | 67,497 | 1,88,708 | 2,59,000 |
Scaffolds > 10 kb | 103 | 65 | NA |
Scaffolds > 40 kb | 8 | 19 | NA |
Scaffolds > 100 kb | 0 | 5 | NA |
CDS* | 3,268 | 3,416 | 3,452 |
Unique CDS* | 176 | 101 | 181 |
Common CDS* | 2,767 | 2,767 | 2,767 |
rRNA genes* | 8 | 6 | 9 |
tRNA genes* | 44 | 40 | 42 |
Genes with functional annotations (%) | 36 | 34 | 55 |