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Table 7 Primers of quantitative reverse transcription-polymerase chain reaction for validation of RNA-Seq data

From: A transcriptomic analysis of Chrysanthemum nankingense provides insights into the basis of low temperature tolerance

GeneID

Primer F (5′-3′)

Primer R (5′-3′)

Blast nr

CL695.Contig1_S2_3

GTGACGAGTTGGTGATGGTG

GTTACCACCTACGAAGGCCA

WRKY transcription factor 4

Unigene75748_S2_1

CGGGTGAAATGCTCTCAAAT

TGCCAAATGGTTCTAAAGGG

WRKY transcription factor 1

Unigene83309_S2_1

ATTTAAACACGCGGATCGAC

CCAGAGTGTGGCTTGGTACA

DREBa

Unigene73473_S2_1

TAAAGGTGGGCCAGAAAATG

ATCATACGCCAGAGCAGCTT

DREB2 transcription factor

Unigene27271_S2_3

ACAACATCCCCTTGGATGAA

GGGTGACAGCATTTGAAGGT

AP2 transcription factor

Unigene93511_S2_3

TGTGCCGCTGTTATCCATTA

CCACACTATCACAGCCCCTT

Ethylene-responsive transcription factor

Unigene37079_S2_1

TCTTCTTTCCCTTTCTGCGA

TGGATCTCCCTCATGACTCC

bHLH128-like

Unigene56969_S2_3

GCATTTGCAGCTGATTCTGA

GCTATCACCGTTGACCCACT

DOF domain class transcription factor

Unigene13900_S2_3

ATCGTGTCGCCGGTATTTAG

GTTGTAGACAAAGCGTCGCA

LEA protein 1

CL2985.Contig1_S2_1

CATCCCCATATTGGTTCCAG

GAACACGAAGCAAGAGGGTC

dehydrin

CL4257.Contig4_S2_1

CTTCTTGCACACTGGTCGAA

GGGGCTTGCTAGGGATAAAG

DEAD-box ATP-dependent RNA helicase 56-like

Unigene6176_S2_3

TGTTTGGCTTGTCAAACTGG

TCCGTGTTATTCCTTTTGCC

DEAD-box ATP-dependent RNA helicase 32-like

Unigene84542_S2_3

CCAGGTTTCGTTTTCGTCAT

GCCTTGAATGCTTTCCACAT

Gibberellin-regulated protein

Unigene85549_S2_3

ACCTCTGTCGGTCCATCAAC

TCGGAACGAGCTCATCTTTT

jasmonate ZIM-domain protein 2

Unigene48078_S2_3

TTTCAGCCGATGGTGATGTA

GTCGTGCCCCACAAGATACT

Serine/threonine-protein kinase