Table 4 Nucleotide composition of simple sequence repeats in the R. solanacearum chromosome

Genome composition

   A

608615

16.37

543922

16.62

64693

14.53

   C

1238438

33.32

1112352

34.00

126086

28.31

   G

1252933

33.71

1099390

33.60

153543

34.47

   T

616427

16.58

515362

15.75

101065

22.70

Mononucleotide SSRs ≥ 6 bp

   Total

1125

444

681

   A

299

26.58

109

24.55

190

27.90

   C

220

19.56

106

23.87

114

16.74

   G

261

23.20

153

34.46

108

15.86

   T

345

30.67

76

17.12

269

39.50

   G+C

481

42.76

259

58.33

222

32.60

   A+T

644

57.24

185

41.67

459

67.40

Dinucleotide SSRs ≥ 6 bp

   Total

14764

13121

1643

   AC/CA

278

1.88

205

0.15

73

4.44

   AG/GA

205

1.39

80

0.61

125

7.61

   AT/TA

47

0.32

11

0.08

36

2.19

   CG/GC

13710

92.86

12521

95.43

1189

72.37

   CT/TC

210

1.42

130

0.99

80

4.87

   GT/TG

323

2.19

174

1.33

149

9.07