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Table 7 Singificantly over- or underrepresented tetranucleotides in the R. solanacearum genome

From: Simple sequence repeats and compositional bias in the bipartite Ralstonia solanacearum GMI1000 genome

 

Chromosome

Megaplasmid

XYZW

Ï„*XYZW

Over/under represented?

Ï„*XYZW

Over/under represented?

AATT

0.6965

--

0.6560

--

ATTG

1.0732

 

0.7270

-

CATC

0.7878

 

0.7738

-

CATG

0.7129

-

0.7167

-

CTAG

0.2747

 

0.3442

 

GATA

0.7165

-

0.7182

-

GTAG

1.2469

+

1.3802

++

TATA

0.7440

-

0.6723

--

TTAA

1.3314

++

1.4219

++

TTGG

0.8569

 

0.6476

--