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Figure 2 | BMC Genomics

Figure 2

From: Computational tradeoffs in multiplex PCR assay design for SNP genotyping

Figure 2

Coverage vs. target multiplex level using two different best-fit tube assignment strategies. These results were all based on N = 1,200 for varying target multiplexing level M. In each trial, the number of allowed tubes is limited to . Full-tube coverage, the percentage of SNPs assigned to full tubes, of close to 80% is achieved at a multiplexing level of 20, though it drops rapidly for higher multiplexing levels. The graph shows a significant improvement in one algorithm over the other, demonstrating that such tradeoffs can be used to effectively compare and contrast competing optimization strategies.

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