Table 3 Annotation of the mitochondrial genome of Squilla mantis. Position numbers refer to positions on the major strand, with the first nucleotide of trnI assigned as number 1. Parentheses indicate genes encoded on the minor strand. Intergenic region numbers refer to the number of non-coding bases between features (positive integers) or the number of overlapping bases (negative integers). Asterisks (*) refer to incomplete termination codons that may be extended by post-transcriptional adenylation.
From: The complete mitochondrial genome of the stomatopod crustacean Squilla mantis
Feature | Position | First codon | Stop codon | Intergenic region |
|---|---|---|---|---|
trnI | 1–69 |  |  |  |
trnQ | (68–135) |  |  | -2 |
trnM | 149–217 |  |  | 13 |
nad2 | 275–1219 | ATA | TAA | 57 |
trnW | 1218–1285 |  |  | -2 |
trnC | (1291–1354) |  |  | 5 |
trnY | (1356–1420) |  |  | 1 |
cox1 | 1421–2959 | ACG | TAA | 0 |
trnL2 | 2955–3021 |  |  | -5 |
cox2 | 3026–3713 | ATG | T* | 0 |
trnK | 3714–3781 |  |  | 0 |
trnD | 3781–3849 |  |  | -1 |
atp8 | 3850–4002 | ATC | TAA | 0 |
atp6 | 3996–4673 | ATG | TAA | -7 |
cox3 | 4673–5461 | ATG | TAG | -1 |
trnG | 5461–5526 |  |  | -1 |
nad3 | 5527–5880 | ATG | TAA | 0 |
trnA | 5884–5948 |  |  | 3 |
trnR | 5953–6017 |  |  | 4 |
trnN | 6019–6087 |  |  | 1 |
trnS1 | 6088–6155 |  |  | 0 |
trnE | 6156–6221 |  |  | 0 |
trnF | (6222–6288) |  |  | 0 |
nad5 | (6289–8001) | ATA | TAA | 0 |
trnH | (8020–8086) |  |  | 18 |
nad4 | (8086–9426) | ATG | TAG | -1 |
nad4L | (9420–9719) | ATG | TAA | -7 |
trnT | 9722–9790 |  |  | 2 |
trnP | (9791–9857) |  |  | 0 |
nad6 | 9900–10386 | ATA | T* | 42 |
cob | 10387–11523 | ATG | TAA | 0 |
TrnS2 | 11523–11592 |  |  | -1 |
AT-rich region 1 | 11593–11822 |  |  | 0 |
nad1 | (11823–12803) | ATA | TAA | 0 |
trnL1 | (12801–12867) |  |  | -3 |
rnl | (12868–14250) |  |  | 0 |
trnV | (14251–14300) |  |  | 0 |
rns | (14301–15132) |  |  | 0 |
AT-rich region 2 | 15133–15994 |  |  | 0 |