Figure 3

Phylogenetic trees of full-length and cytoplasmic domain of syndecans. The CLUSTALW outputs of TCOFFEE alignments of the amino acid sequences of (A), full-length, and (B), cytoplasmic domains, of syndecans in our dataset were used to generate unrooted phylogenetic trees by the maximum likelihood reconstruction method, PHYML, using the WAG substitution model. Bootstrap analysis was run for 100, (A), or 500, (B), cycles and the bootstrap replication values are shown at each node. Scale bars = 0.1 substitution/site.