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Table 2 QTL results for a subset of genes pertaining to a QTL hotspot localised around marker D6Mit254 (chr. 6).

From: Genetical genomics: use all data

Gene

-log10 P-value of QTL (model 1) a,b

Best transcript

P-value of best transcripta

Position of QTL (model 2)c

-log10 P-value of QTL (model 2) a,d

Reln

4.4

0610039D01Rik

30.0

S05Gnf018.190

21.0

Chrng

4.1

Gpx1

32.3

D6Mit254

5.6

Slc6a1

3.7

Mad2l1

35.5

D6Mit254

5.9

Calm4

3.6

Adprhl2

37.8

S17Gnf094.470

7.2

Mapk6

3.5

Tusc2

41.7

D6Mit254

10.9

Adra2b

3.3

Sox11

30.9

S04Gnf147.400

3.6

Mapk1

3.3

1110011K10Rik

34.4

D6Mit254

6.2

Gad1

3.0

Bzrp

45.3

D6Mit254

3.2

Htr4

2.5

Hbb-b2

45.5

D18Mit19

11.7

  1. a Values reported are -log10 (P-value), that is a value of x means that significance is 10-x.
  2. b P-value when only the marker is included in the model.
  3. c QTL position when the best transcript is also included in the model.
  4. d QTL P-value when the best transcript is also included in the model.