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Table 5 Analysis of reporter metabolites and neighboring enzymes, using the "GO term finder".

From: Analysis of Aspergillus nidulans metabolism at the genome-scale

Effect of growth medium p-values for different media

Effect of genotype p-values for different strains

GO term

Probability

GO term

Probability

Carboxylic acid metabolism

1.73E-15

Carboxylic acid metabolism

5.24E-16

Organic acid metabolism

1.73E-15

Organic acid metabolism

5.24E-16

Generation of precursor metabolites and energy

1.89E-13

Amino acid biosynthesis

1.13E-13

Energy derivation by oxidation of organic compounds

1.11E-12

Amine biosynthesis

2.80E-13

Cellular metabolism

1.55E-09

Amine metabolism

6.05E-13

Amino acid biosynthesis

1.86E-09

Amino acid metabolism

1.84E-12

Metabolism

2.46E-09

Amino acid and derivative metabolism

4.67E-12

Fermentation

3.25E-09

Cellular metabolism

5.27E-09

Amine biosynthesis

3.59E-09

Metabolism

8.56E-09

Main pathways of carbohydrate metabolism

5.19E-09

Acetate metabolism

1.99E-08

Nonprotein amino acid biosynthesis

6.82E-09

Aspartate family amino acid metabolism

2.06E-08

Tricarboxylic acid cycle intermediate metabolism

7.64E-09

Nitrogen compound biosynthesis

8.25E-08

Acetate metabolism

1.26E-08

Arginine biosynthesis

8.25E-08

Nonprotein amino acid metabolism

3.42E-08

Cellular biosynthesis

9.29E-08

Coenzyme metabolism

1.32E-07

Biosynthesis

2.65E-07

Amino acid metabolism

1.47E-07

Nitrogen compound metabolism

3.19E-07

Malate metabolism

1.81E-07

Urea cycle intermediate metabolism

4.12E-07

Amino acid and derivative metabolism

2.70E-07

Arginine metabolism

4.12E-07

Aldehyde metabolism

5.36E-07

Glutamine family amino acid metabolism

6.78E-07

Amine metabolism

5.84E-07

Nonprotein amino acid biosynthesis

2.01E-06

  1. Analysis of reporter metabolites and neighboring enzymes, using the "GO term finder" available at the Saccharomyces Genome Database [35] and the corresponding ORFs in yeast, retrieved via the reconstructed metabolism of S. cerevisiae [22].