Skip to main content

Table 6 56 Putative extracellular proteins (EX) derived from the 1 out of 3 predictions with significant DBSubloc or/and GTD prediction

From: Genome-wide subcellular localization of putative outer membrane and extracellular proteins in Leptospira interrogans serovar Lai genome using bioinformatics approaches

Lai Locus

Copen locus

Protein annotation

SWISS-PROTa

PDB codeb

LB258

LIC20197

Cysteine protease

-

1deu

LA0975

LIC12680

Fimh-like protein

-

1a6c

LA0858

LIC12930

Fimh-like protein/hypothetical protein

-

1dab

LA0492

LIC13060

LipL36 protein

-

1acc

LA3469

LIC10713

Iron-reglulated protein A/LruB/putative lipoprotein

-

1rmg

LA3075

LIC10464

Surface protein Lk90-like protein/Ig-like repeat domain

P35828

1dab

LA3778

LIC10464

Surface protein Lk90-like protein/Ig-like repeat domain

Q52657

1dbg

LA0378

LIC10325

TPR-repeat-containing proteins/hemolysin

Q98KC1

1a17

LA3138

LIC10973

Transmembrane outer membrane protein L1

-

1acc

LA1353

LIC12375

LRR containing protein

Q9RBS2

1jl5

LB196

LIC20154

LRR containing protein/lipoprotein

-

1d0b

LA0416e

LIC10365

Putative lipoprotein (LpL effector)

-

1gq8

LA0962d

LIC12690

Putative lipoprotein

-

1eut/1koe

LA1569c

LIC12208

Putative lipoprotein

P15345

1acc

LA2823e

LIC11207

Putative lipoprotein

-

1gq8

LA3064e

LIC11030

Putative lipoprotein

-

1czf

LA3848c

LIC13075

Putative lipoprotein

-

1qjv

LA3867

LIC13086

Putative lipoprotein

-

1cwv

LA1159

LIC12525

Putative outer membrane protein/putative lipoprotein

-

1cs6

LA1905

LIC11996

Putative outer rmembrane protein/hypothetical protein

-

1kit

LA1939

LIC11966

Putative outer membrane protein/hypothetical protein

-

1fio

LA2273

LIC11665

Putative outer membrane protein/hypothetical protein

 

1air

LA0563d

LIC13006

Hypothetical protein/putative lipoprotein (LenC)

-

1koe

LA0695d

LIC12906

Hypothetical protein/putative lipoprotein (LenA/LfhA/Lsa24)

-

1koe

LA1433d

LIC12315

Hypothetical protein/putative lipoprotein (LenD)

-

1koe

LA3103d

LIC10997

Hypothetical protein (LenB)

-

1koe

LA4073d

LIC13248

Hypothetical protein/putative lipoprotein (LenF)

-

1koe

LA4324d

LIC13467

Hypothetical protein/conserved hypothetical protein (LenE)

-

1koe

LA3370

LIC10793

Conserved hypothetical protein/surface antigen (Lp24)

-

1l0q

LA0965

LIC12676

Conserved hypothetical protein

P25156

1d0b

LA1066

LIC12601

Conserved hypothetical protein

-

1dbg

LA1498

LIC12260

Conserved hypothetical protein

-

1ogq

LA2811

LIC11217

Conserved hypothetical protein

P25146

1ogq

LA3734

LIC10495

Conserved hypothetical protein/CM protein

-

1dab

LA3834c

LIC13066

Conserved hypothetical protein

P15345

1acc

LA4227

LIC13381

Conserved hypothetical protein

-

1sli

LA0663

LIC12930

Conserved hypothetical protein/hypothetical protein

-

1acc

LA0423c

LIC10371

Conserved hypothetical protein/putative lipoprotein

P15345

1qjv

LA1567c

LIC12209

Conserved hypothetical protein/putative lipoprotein

P15345

1czf

LA1568c

LIC12209

Conserved hypothetical protein/putative lipoprotein

P15345

1czf/1dbg

LA1691c

LIC12099

Conserved hypothetical protein/putative lipoprotein

-

1acc

LA3340e

LIC10821

Conserved hypothetical protein/putative lipoprotein

-

1ee6

LA3394e

LIC10774

Conserved hypothetical protein/putative lipoprotein

-

1gq8

LA3501

LIC10686

Conserved hypothetical protein/putative lipoprotein

-

1air

LA0283c

LIC10239

Hypothetical protein

-

1air

LA0426c

LIC10373

Hypothetical protein

P56964

1acc

LA0996d

LIC12668

Hypothetical protein

-

1koe

LA1764

LIC12048

Hypothetical protein

-

1qlg

LA1869

LIC12023

Hypothetical protein

-

1k14

LA2272

LIC11664

Hypothetical protein

 

1dab

LA3240

LIC10898

Hypothetical protein

 

1rmg

LA0074

LIC10067

Hypothetical protein/conserved hypothetical protein

-

1dbg

LA1065

LIC12602

Hypothetical protein/conserved hypothetical protein

-

1dab

LA1762

LIC12048

Hypothetical protein/conserved hypothetical protein

-

1qcx

LA3649

LIC10561

Hypothetical protein/conserved hypothetical protein

-

1qcx

LA3881

LIC13101

Hypothetical protein/OM with integrin like repeat domains

P35825

1dab

  1. Note LRR: Leucine-rich repeat, a: Swiss-Prot ID derived from DBsubloc database, b: PDB code derived from GTD prediction, c: pfam06739: SBBP (seven bladed beta propeller) repeat d: pfam07588: DUF1554, e: pfam07602: DUF1565