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Table 3 SIDER elements present in the L. braziliensis chromosome 32

From: The SIDER2 elements, interspersed repeated sequences that populate the Leishmania genomes, constitute subfamilies showing chromosomal proximity relationship

Namea

Subfamily

Size (%GC)

32-21338r

a

507 (70.8)

32-33564r

a

429 (70.2)

32-34297r

a

531 (69.3)

32-46283d

a

503 (69.8)

32-52976r

a

401 (70.3)

32-56914r

a

532 (69.2)

32-82781d

a

526 (69.6)

32-190328r

 

438 (55.7)

32-218978d

a

465 (72.5)

32-257472d

 

565 (66.4)

32-335085r

b

422 (66.4)

32-356555d

b

388 (67.3)

32-380245d

b

422 (67.5)

32-397315d

b

340 (71.2)

32-447556d

 

499 (57.7)

32-528182d

c

459 (66.2)

32-558759d

c

629 (63.3)

32-581122r

c

634 (64.2)

32-632143r

 

585 (60.3)

32-640725r

 

483 (56.9)

32-693667d

d

983 (57.8)

32-695383d*

d

289 (60.2)

32-716506r

d

981 (58.0)

32-789725r

e

555 (70.6)

32-799255r

e

550 (71.1)

32-816512r

e

550 (71.1)

32-819658r

e

550 (70.7)

32-836061r

e

569 (71.9)

32-839556r

e

565 (71.3)

32-842876r

e

565 (71.7)

32-850687r

e

546 (71.4)

32-867036r

f

508 (67.7)

32-875142r

f

486 (67.7)

32-904165d

 

442 (53.9)

32-965250r

 

447 (57.1)

32-977561r

 

540 (60.2)

32-1033093d

g

570 (68.6)

32-1047782r

g

571 (67.6)

32-1091401r

h

604 (67.1)

32-1121626r

h

605 (67.1)

32-1308414d

i

523 (64.4)

32-1332630r

i

528 (64.2)

32-1396673d

i

496 (64.5)

32-1539141d

j

436 (64.2)

32-1547986d

j

436 (64.2)

32-1558134d*

j

173 (68.8)

32-1702406d

k

443 (63.9)

32-1714067d

k

443 (64.3)

  1. aThe elements are named with the chromosome number (i.e., 32) and the position according the contig LbrM32 (version 2.0) sequence; d and r denote that the element is located on the plus or minus strand, respectively.
  2. *Truncated element.