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Table 1 Homologs of known protein secretion systems identified in the genome of R. l. bv. viciae 3841.

From: Identification of protein secretion systems and novel secreted proteins in Rhizobium leguminosarum bv. viciae

System

Homolog I

Homolog II

Homolog III

Homolog IV

a) General export pathway

SecB

RL0006

   

SPase II

RL0410

   

YidC

RL0453

   

SecD

RL0680

   

SPase I

RL1510

   

SecE

RL1759

   

SecY

RL1794

   

SecF

RL2055

   

SecG

RL2512

   

SecA

RL4298

   

FtsY

RL4543

   

Ffh

RL4547

   

b) Twin arginine pathway

TatA

RL2046

   

TatB

RL2047

   

TatC

RL2048

   

c) Type I pathway

AprE

RL3657

RL0071

RL0622

pRL90165

AprD

RL3658

RL0072

RL0623

pRL90164

TolC

none

   

d) Type II pathway

Any component

none

   

e) Type III/flagellar pathway

FliF

RL0695

   

FlhB

RL0699

   

FliG

RL0700

   

FliN

RL0701

   

FliM

RL0702

   

FliI

RL0705

   

FlgI

RL0712

   

FlgH

RL0714

   

FliL

RL0715

   

FliP

RL0716

   

FliQ

RL0734

   

FlhA

RL0735

   

FliR

RL0736

   

f) Type IV pathway

VirB1

pRL70149

   

VirB2

pRL70150

   

VirB3

pRL70151

   

VirB4

pRL70152

   

VirB5

pRL70153

   

VirB6

pRL70154

   

VirB8

pRL70155

   

VirB9

pRL70156

   

VirB10

pRL70157

   

VirB11

pRL70158

   

g) Type V pathway

AT

RL1927

RL1196

RL1069

 

TPS

None

   

h) Holins

Holin

None

   

i) Large conductance mechanosensitive channel

MscL

RL0602

   

j) Pilus

PilQ

RL0210

   

PilA

RL0211

   

CpaA

RL0212

   

CpaB

RL0213

   

CpaC

RL0214

   

CpaD

RL0215

   

CpaE

RL0216

   

CpaF

RL0217

   

TadB

RL0218

   

TadC

RL0219

   

k) Fimbrial usher protein

PapC

none

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