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Table 7 Features of the DNA sequences used in this work.

From: Survey of microsatellite clustering in eight fully sequenced species sheds light on the origin of compound microsatellites

  

H. sap.

M. mul.

M. mus.

R. nor.

O. anat.

G. gal.

D. rerio

D. mel

whole genome

#1

23

21

20

21

19

31

25

6

 

nt2

2 832

2 646

2 547

2 477

409

984

1 523

118

cds

#1

41 997

35 463

36 240

14 026

26 818

22 013

31 623

17 242

 

nt2

64

51

55

20

36

32

44

28

5'-UTR

#1

31 051

16 925

27 882

11 269

1 737

10 353

8 717

14 466

 

nt2

9

4

7

3

0.2

1

1

4

3'-UTR

#1

28 839

17 284

27 124

11 441

2 436

12 444

8 615

11 351

 

nt2

31

12

28

7

1

6

5

5

  1. 1number of individual fasta sequences
  2. 2length of the sequence, not considering the character 'N')
  3. All data were obtained with the tool 'Seq-CC' (see section Bioinformatics)
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BMC Genomics

ISSN: 1471-2164

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