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Table 5 Microsatellite loci obtained through cross-species amplification

From: Isolation and characterization of microsatellite markers from the olive fly, Bactrocera oleae, and their cross-species amplification in the Tephritidae family

Locus

B. oleae motif

Motif of other Tephritidae

Boms3a

(GT)14

Bt: (AT)G2(AT)3AC(AT)A2(AT)(GT)2(AT)/(TG)2(TA)2(TG)8

Bco: (TG)2TA(GT)N7(TG)2(TA)/(TG)(GA)(TG)2(TA)2(TG)(TA)3(TA3)2(TG)3C(GT)3

Bcu: (TA)3A(TA)CA2(GT)4

Bd: (TA)2TG(TA)CA(TA)3A2(TG)5CA(TG)(TC)2(TA)2(TG)7

Cf:(TG)4T2(TG)8

Boms3b

(CAA)3CAG(CAA)3/

(CAA)2CAG(CAA)

Bco: (CAA)2AAA(CAA)/(CAA)3

Bd: (CAA)2AA(CAA)/(CAA)5

Bt : (CAA)2A(CAA)/(CAA)3

Cc:/(CAA) A3(CAA)2

Rc: A4CA2CGATACA5N9A5/(CAA) G(CAA)2(CAG)

Boms10

(CA)10GA(CA)2

Cc: -

Cf: (CA) GAC(CA)4

Rc: -

Boms11

(CA)7CG(CA)3

Bco: -

Rc: -

Boms14

(AT)2GT(AT)11

Bco:(TA)2G(TA) CA(TA)3A2

Af: G6N7(GT)3

Boms16

(CA)10

Bco: T5ATCA4/A5TCA2A2

Bd: (CA) TG(CA)4

Bt: (CA) TA(CA)4CG(CA)

Boms21

(GT)GG(GT)13AT(GT)

Bco: (GA)3(GT)6

Bcu: (AT)3(GT)(AT)(GT)7

Bt: (GA)3(GT)3AT(GT)5AT(GT)

Boms60

CACA2(CA3)2

A6CA3GCA6TA5CA4N26A2GA9CGA4

Bco: CACA2(CA3)2/A5C2A3(GT)2A4G2A5N7A5N5A3CA3CA2CA3N4A3N3A2N3A5GA2CGA4

Bd: CACA2(CA3)2/A13CA6TA4N4A3CA2TA2CA5

Bt: CACA2(CA3)2/A6CA3GCA6TA5CA5N28A2GA9CGA4

Af: CACA2(CA3)3/(GA)4A3GA8GA4N9GA3GATA4TA8GACA5CA4

Al: CACA2(CA3)3/(GA)4A3GA9GA4N9CA3GATA4TA11CA5CA5

Aser: CACA2(CA3)3/CA5GA5GA4TACA4TACA2TCA2CA3 GATA4TA4TACA5CA8

Astr: CACA2(CA3)3/(GA)4A3GA6C2A3 TACA2TCA2CA3 GATA4TA9CA12

Boms64a

CAGA(CA)2C(CA)4N12(CA)4C(CA)2

Bt: (CA)2A(CA)2C(CA)T2(CA)2

  1. In bold: cases of preservation of the expected motif
  2. N: non-motif bases
  3. Bco: B. correcta; Bcu: B. cucurbitae; Bd: B. dorsalis; Bt: B. tryoni; Cc: C. capitata; Cf: C. fasciventris; Af: A. fraterculus; Al: A. ludens; Aser: A. serpentina; Astr: A. striata; Rc: R. cerasi
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BMC Genomics

ISSN: 1471-2164

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