Cluster name | size* | Significant conditions (P value) | Enriched TFBS (P value) | Enriched gene functions (P-value) |
---|---|---|---|---|
ribosome proteins | 213,85 | nitrogen depletion(7.1e-3), steady state (3.9e-4) | RAP1 (2.9e-60) | ribosomal protein (2.1e-160) |
rRNA processing | 329,113 | steady state (8.9e-4) | ABF1 (5.2e-4), PAC (1.2e-127), RRPE (2.7e-63) | rRNA processing (4.3e-77), nucleic acid binding (1.6e-25) |
ubiquitin | 113,88 | diamide stress(4.2e-3), menadione stress(2.7e-2) | RPN4 (4e-12) | ubiquitin / proteasomal pathway (8.3e-12) |
oxidative stress | 40,38 | hydrogen peroxide stress (4.8e-8), menadione stress(4e-7), diamide stress (3.2e-6) | CAD1(5.7e-15), YAP1(1.9e-15) | oxidative stress response (9.3e-8), metabolism of phenylalanine (4.2e-8), metabolism of tyrosine (2.7e-8) |
respiration | 55,97 | steady state(1.8e-7) | HAP4 (1.3e-16), SKN7(6.3e-8), MSN24a(7.4e-4) | respiration (2.5e-38), electron transport and membrane-associated energy conservation (5.1e-45) |
purin metabolism | 42,48 | menadione stress (4.1e-6), amino acid starvation (4.8e-3) | BAS1 (3.2e-5) | purin nucleotide/nucleoside/nucleobase anabolism (6.2e-10) |
stress response and protein folding | 48,46 | heat shock (4.5e-7), diamide stress (1.7e-4), osmolarity stress (6.5e-4) , MSN2/4 and YAP1 deletion (3.8e-3) | HSF1 (4.7e-3), | protein folding and stabilization (8e-8), stress response(3.0e-5) |
stress response and heat shock | 87,191 | heat shock (5.2e-3) | HSF1 (1.5e-3), MSN24 (6.1e-11), MSN24a (9.6e-11), STRE (1.0e-5), GIS1 (1.9e-4) | C-compound and carbohydrate metabolism (1.0e-3), energy (7.4e-4) |
cell cycle | 86,87 | α factor (3.5e-8), cdc15 (3.7e-8), cdc28 (4.5e-2), elu (4.0e-6) | MCM1 (1.0e-10), SWI4 (4.16e-7), FKH1 (6.6e-7), MBP1(3.6e-4), TATA (1.3e-4) | cell cycle and DNA processing (5.1e-9), cytokinesis (cell division) (2.9e-6), pheromone response (7.6e-4) |
DNA topology | 35,45 | cln3, clb2 (2.1e-2) | GCN4(4.3e-6), MBP1 (2.0e-5), MCM1 (3.2e-3), SWI4 (1.1e-3), XBP1 (1.3e-5) | DNA topology (1.3e-22), somatic/ mitotic recombination (8.9e-9) |
cell cycle (G1 phase) | 108,62 | α factor (3.35e-11), cdc 15 (2.5e-10), cdc28 (7.8e-6) | MBP1 (3.7e-14), SWI4 (6.4e-5) | cell cycle and DNA processing (1.4e-12) |
nitrogen, sulfur & selenium metabolism | 37,16 | amino acid starvation (1.2e-5), nitrogen depletion (4.2e-2) | CBF1(3.3e-7), GCN4 (7.3e-5), MET31 (8.7e-4), MET4(1e-7) | amino acid metabolism (1.5e-30), nitrogen, sulfur and selenium metabolism (1.3e-13) |
glycolysis regulation | 38,78 | Disulfide-reducing agent stress (1.6e-4), diamide (1.5e-3) | GCR1 (4.6e-3) | sugar, glucoside, polyol and carboxylate catabolism (3.3e-10), glycolysis and gluconeogenesis (3.1e-11) |