Table 1 COG annotations of the shared genes among the chromosomal core and extended core sets
From: Plasmids are vectors for redundant chromosomal genes in the Bacillus cereus group
COG ID | Functional annotation | Chromosome number | Plasmid number |
|---|---|---|---|
32477 | Predicted membrane protein [Function unknown] | 20 | 7 |
131886 | Stage V sporulation protein AE | 20 | 6 |
131885 | Stage V sporulation protein AC | 20 | 6 |
183504 | Stage V sporulation protein AD | 20 | 6 |
178955 | ATP-dependent Clp protease proteolytic subunit | 20 | 5 |
105987 | Hypothetical protein | 20 | 5 |
193180 | MacB-like periplasmic core domain. | 20 | 4 |
73014 | This family is composed of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE) and release of lipoproteins from the cytoplasmic membrane (LolCDE) | 20 | 4 |
162057 | Arsenic-resistance protein | 20 | 4 |
31088 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 20 | 4 |
162505 | RND family efflux transporter, MFP subunit | 20 | 4 |
115457 | Sugar transport protein | 20 | 4 |
184117 | Arsenate reductase | 20 | 4 |
181585 | Glucose-1-dehydrogenase | 20 | 4 |
32652 | Zn-ribbon-containing protein involved in phosphonate metabolism | 20 | 3 |
163006 | Polysaccharide deacetylase family sporulation protein PdaB | 20 | 3 |
31331 | ABC-type antimicrobial peptide transport system, ATPase component | 20 | 3 |
31475 | Uncharacterized conserved protein | 20 | 3 |
197627 | Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer) | 20 | 3 |
190390 | FtsX-like permease family | 20 | 3 |
179411 | Adenine phosphoribosyltransferase | 20 | 2 |
31326 | ABC-type multidrug transport system, ATPase component | 20 | 2 |
32452 | Sugar phosphate permease | 20 | 1 |
151609 | Protein of unknown function | 20 | 1 |
188197 | Penicillin-binding protein, 1A family | 20 | 1 |
34374 | Predicted membrane protein | 20 | 1 |
31911 | Predicted transcriptional regulators | 20 | 1 |
189896 | Formate/nitrite transporter | 20 | 1 |
34876 | Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain | 20 | 1 |
30931 | Uncharacterized membrane-associated protein | 20 | 1 |
191813 | Major facilitator superfamily | 20 | 1 |
162221 | Cysteine synthase A | 20 | 1 |
181811 | Membrane-bound transcriptional regulator LytR | 20 | 1 |
31361 | Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs | 20 | 1 |
179521 | D-serine dehydratase | 20 | 1 |
188607 | D-alanyl-lipoteichoic acid biosynthesis protein DltD | 20 | 1 |
162128 | Carboxylate/amino acid/amine transporter | 20 | 1 |
110729 | Collagenase | 20 | 1 |
129987 | Amino acid transporter | 20 | 1 |
173869 | The substrate-binding component of an ABC-type oligopeptide import system containing the type 2 periplasmic binding fold | 19 | 13 |
163059 | Germination protein, Ger(x)C family | 19 | 7 |
183898 | N-acetylglucosamine-binding protein A | 19 | 6 |
189798 | Sodium/hydrogen exchanger family | 19 | 6 |
30836 | Putative regulatory ligand-binding protein related to C-terminal domains of K channels | 19 | 4 |
178836 | L-lactate dehydrogenase | 19 | 1 |
31520 | Transcriptional regulators, similar to M | 19 | 1 |
31856 | Acetyltransferases, including N-acetylases of ribosomal proteins | 19 | 1 |
48387 | Nitroreductase-like family 4 | 19 | 1 |
176695 | C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA) and similar proteins | 19 | 1 |
145290 | BCCT family transporter | 19 | 1 |
110729 | Collagenase | 19 | 1 |
30749 | Predicted esterase | 19 | 1 |
31331 | ABC-type antimicrobial peptide transport system, ATPase component | 19 | 1 |
147640 | NosL. NosL is one of the accessory proteins of the nos (nitrous oxide reductase) gene cluster | 19 | 1 |
162053 | Serine transporter | 19 | 1 |