Table 4 Overview over clusters and singletons regulated both by LsRXR knock down and during maturation of adult females [ 18 ]
Contig/singleton | Regulation in adult female lice (former study) | Regulation in this knock-down study | Annotation |
|---|---|---|---|
CL5Contig7 | Down from T1-T6 | Down regulated (3.8 times) | Lepeophtheirus salmonis clone LS0008 hypothetical protein mRNA, partial cds |
CL5Contig8 | Down from T1-T6 | Down regulated (3.3 times) | Lepeophtheirus salmonis clone LS0027 hypothetical protein mRNA, complete cds |
CL333Contig1 | Down from T1-T6 | Up regulated (30536 times) | Putative cuticle protein [Lepeophtheirus salmonis] |
CL194Contig1 | Down from T1-T6 | Up regulated (2.3 times) | 60S ribosomal protein L17 [Lepeophtheirus salmonis] |
CL5Contig2 | Down from T1-T6 | Up regulated (3.9 times) | ABU41059.1 hypothetical protein [Lepeophtheirus salmonis] |
CL12Contig1/2 | Up from T1-T6 | Down regulated (9 times) | vitellogenin 1 [Lepeophtheirus salmonis] |
CL3Contig1/ FN825 | Up from T1-T6 | Down regulated (4.1 times) | vitellogenin 2 [Lepeophtheirus salmonis] |
CL1Contig20 | Up from T1-T6 | Down regulated (1.55*1024 times) | LsYAP [Lepeophtheirus salmonis] |
FN1569 | Up from T1-T6 | Up regulated (2.7 times) | Lepeophtheirus salmonis clone LS0038 putative cellular retinoic acid/retinol binding protein mRNA, complete cds |
CL1632Contig1 | Up only in preAII | Down regulated (3.2 times) | Lepeophtheirus salmonis clone PU676 hypothetical protein mRNA, complete cds |