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Figure 6 | BMC Genomics

Figure 6

From: De novo assembly and transcriptome analysis of Atlantic salmon macrophage/dendritic-like TO cells following type I IFN treatment and Salmonid alphavirus subtype-3 infection

Figure 6

Relative expression levels after type I IFN treatment and SAV-3 infection in TO-cells determined by qRT-PCR analysis. A and B shows 12 DEGs upregulated following type I IFN treatment and SAV-3 infection of TO-cells. Data are expressed as mean fold changes of gene expression for type I IFN treated and SAV-3 infected TO-cells (n = 3) relative to the TO-cell controls (n = 3) after normalization to β-actin. SEM is presented as error bars. An asterisk (*) denotes significant upregulation (p < 0.05) when compared to the controls determined by Student’s t-test. C shows downregulation of eight DEGs downregulated following type I IFN treatment and SAV-3 infection. Data are expressed as log2 fold changes of gene expression for type I IFN treatment and SAV-3 infected cells (n = 3) relative to the TO-cell controls (n = 3) after normalization with β-actin.

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