Skip to main content

Table 6 Apoptosis associated genes expressed in response to type I IFN treatment and SAV-3 infection in TO-cells

From: De novo assembly and transcriptome analysis of Atlantic salmon macrophage/dendritic-like TO cells following type I IFN treatment and Salmonid alphavirus subtype-3 infection

Gene name

Gene ID

Accession no

Fold increase (TO-VS-IFN)

Fold increase (TO-VS-SAV3)

Co-upregulated

    

 Caspase-1 precursor

Unigene6881

ACI68032

5,17

3,01

 Caspase-8-like

Unigene9757

XP_001335163

5,60

2,37

 XIAP-associated factor 1

CL3105.Contig1

NP_001134926

2421,31

1093,93

 Galectin-9

CL1161.Contig8

ACI66798

211,64

72,25

 Apoptosis-associated speck-like protein

CL4101.Contig1

XP_003197975

8,37

9,03

 Tripartite motif-containing protein 16

CL8518.Contig3

ACI34059

53,16

20,02

 Apoptosis regulator BAX

Unigene31520

ACI68449

27,07

10,92

 CASP8 and FADD-like apoptosis regulator

Unigene16516

NP_001254595

6,07

3,69

Co-downregulated

    

 Programmed cell death 4a

CL4790.Contig1

NP_998153

−2,00

−2,54

 Death-associated protein kinase 2

CL11158.Contig1

XP_683154

−2,17

−3,02