Table 3 Significant GO enrichment of hypermethylated genes in PA64S (S)
Locus ID | DMR location | Annotation | p-value |
|---|---|---|---|
LOC_Os01g70080 | Upstream 2k/ Intron | NB-ARC domain containing protein | 1.43E-42 |
LOC_Os07g04950 | Upstream 2k | Early nodulin 75-like protein | 2.33E-29 |
LOC_Os01g70100 | Upstream 2k/5'-UTR | zinc finger DHHC domain-containing protein | 1.21E-22 |
LOC_Os09g38100 | Upstream 2k | phosphate carrier protein, mitochondrial precursor | 1.84E-15 |
LOC_Os09g39570 | Upstream 2k | beta-amylase | 2.29E-15 |
LOC_Os03g25840 | Upstream 2k | Amino acid permease family protein | 2.8E-14 |
LOC_Os12g30520 | Upstream 2k | pumilio-family RNA binding repeat containing protein | 1.06E-13 |
LOC_Os12g35730 | Upstream 2k | transposon protein, putative, CACTA, En/Spm sub-class | 1.36E-12 |
LOC_Os10g31780 | Upstream 2k | oxidoreductase | 2.25E-12 |
LOC_Os01g04330 | Upstream 2k | Probable calcium-binding protein CML16 | 2.77E-11 |
LOC_Os06g42420 | Upstream 2k | transposon protein, putative, unclassified | 1.08E-10 |
LOC_Os01g70360 | Upstream 2k | Long chain base biosynthesis protein 2b | 1.21E-10 |
LOC_Os12g40130 | Upstream 2k | phosphoribosyl transferase | 6.86E-10 |
LOC_Os01g18620 | Upstream 2k | transferase family protein | 7.06E-10 |
LOC_Os12g30520 | 5'-UTR | pumilio-family RNA binding repeat containing protein | 1.06E-13 |
LOC_Os04g30490 | 5'-UTR/ CDS/ Intron | MATE efflux family protein | 3.05E-11 |
LOC_Os01g62890 | 5'-UTR | prenylated rab acceptor | 3.75E-11 |
LOC_Os01g70540 | CDS/ Intron | retrotransposon protein | 3.94E-31 |
LOC_Os01g20880 | CDS | OsWAK3 | 1.06E-15 |
LOC_Os01g70040 | CDS/Intron | transposon protein, CACTA, En/Spm sub-class | 1.08E-14 |
LOC_Os01g70030 | CDS/Intron | transposon protein, CACTA, En/Spm sub-class | 1.5E-14 |
LOC_Os04g02920 | CDS/3'-UTR | leucine-rich repeat family protein | 2.2E-14 |
LOC_Os04g35210 | CDS | Leucine Rich Repeat family protein | 9.11E-12 |
LOC_Os06g03850 | CDS | impaired sucrose induction 1 | 8.63E-11 |
LOC_Os07g41610 | CDS/Intron | retrotransposon protein, Ty1-copia subclass | 1.86E-10 |
LOC_Os06g36540 | CDS | retrotransposon protein, Ty3-gypsy subclass | 9.81E-10 |
LOC_Os07g04940 | Intron | PE-PGRS family protein precursor | 2.33E-29 |
LOC_Os08g21920 | Intron | retrotransposon protein | 5.37E-23 |
LOC_Os06g21950 | Intron | inorganic phosphate transporter | 7.93E-15 |
LOC_Os12g19549 | Intron | telomerase reverse transcriptase | 1.36E-12 |
LOC_Os09g23650 | Intron | FAM10 family protein | 2.88E-11 |
LOC_Os06g03850 | Intron | impaired sucrose induction 1 | 8.63E-11 |
LOC_Os10g30090 | Intron | amino acid permease | 4.79E-10 |
LOC_Os09g21770 | 3'-UTR | ES43 protein | 1.03E-12 |
LOC_Os04g47410 | 3'-UTR | DHHC zinc finger domain containing protein | 5.04E-12 |
LOC_Os01g70190 | Downstream 2k | exostosin family domain containing protein | 9.18E-65 |
LOC_Os01g70550 | Downstream 2k | heparan-alpha-glucosaminide N-acetyltransferase | 3.94E-31 |
LOC_Os12g36410 | Downstream 2k | transposon protein, Pong sub-class | 9.30E-24 |
LOC_Os01g70810 | Downstream 2k | homeobox domain containing protein | 2.97E-23 |
LOC_Os01g70270 | Downstream 2k | auxin response factor | 2.93E-21 |
LOC_Os04g12060 | Downstream 2k | retrotransposon protein | 2.75E-19 |
LOC_Os01g67980 | Downstream 2k | cysteine proteinase EP-B 1 precursor | 1.81E-16 |
LOC_Os01g71070 | Downstream 2k | xylanase inhibitor | 1.73E-15 |
LOC_Os09g39560 | Downstream 2k | genetic modifier | 2.29E-15 |
LOC_Os01g70020 | Downstream 2k | DEK C terminal domain containing protein | 3.62E-15 |
LOC_Os05g23610 | Downstream 2k | protein phosphatase inhibitor 2 containing protein | 2.20E-14 |
LOC_Os01g70690 | Downstream 2k | Rapid ALkalinization Factor RALF family protein | 7.42E-14 |
LOC_Os02g17780 | Downstream 2k | ent-kaurene synthase, chloroplast precursor | 8.65E-14 |
LOC_Os05g12210 | Downstream 2k | chalcone synthase | 1.15E-12 |
LOC_Os04g47420 | Downstream 2k | transmembrane amino acid transporter protein | 5.04E-12 |
LOC_Os07g17390 | Downstream 2k | PsbP | 2.81E-11 |
LOC_Os10g34910 | Downstream 2k | secretory protein | 3.37E-11 |
LOC_Os02g15690 | Downstream 2k | polygalacturonase | 5.54E-11 |
LOC_Os01g01840 | Downstream 2k | helix-loop-helix DNA-binding domain containing protein | 6.27E-11 |
LOC_Os06g40200 | Downstream 2k | calcium-binding mitochondrial carrier | 1.04E-10 |
LOC_Os01g70370 | Downstream 2k | serine palmitoyltransferase 2 | 1.21E-10 |
LOC_Os01g45750 | Downstream 2k | bile acid sodium symporter family protein | 7.05E-10 |
LOC_Os01g18630 | Downstream 2k | aspartic proteinase oryzasin-1 precursor | 7.06E-10 |
LOC_Os06g36550 | Downstream 2k | retrotransposon protein, Ty3-gypsy subclass | 9.81E-10 |
LOC_Os01g70900 | Downstream 2k | retrotransposon protein | 9.84E-10 |