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Table 3 Mapping results against the Prunus persica genome and gene models

From: The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

A

OCV3

(OCV3-91k)

(OCV3-101k)

Number of sequences

192,097

90,786

101,311

Number of mapped sequences

59,851 (31.1%)

53,600(59%)

6,251 (6.2%)

Number of matches

64,292

54,954

9,338

Number of matched exons

209,795

200,252

9,543

Number of exons/model

3.26

3.64

1.02

Mean of identity percent

83.99%

82.75%

91.26%

Number of monoexonics

29,767

20,591

9,176

B

(OCV3-91k)

(OCV3-101k)

Number of sequences

90,786

101,311

Number of mapped contigs

64,001 (70.5%)

8,380 (8.27%)

Number of P. persica gene models

17,038 (59.4%)

5,265 (18.3%)

  1. A Mapping results (BLAT software) for OCV3, OCV3-91k (Unigenes with BlastX hit) and OCV3-101k (unigenes without BlastX hit) against the Prunus persica genome.
  2. B Mapping results (BlastN) for OCV3-91k and OCV3-101k against the Prunus persica gene models.