Figure 3

CCC analysis. a. All INDELs in the analysis we classified as either change in copy count (CCC) or not change in copy count (NCCC) as defined in the figure. b. The CCC vs NCCC percent distribution of insertions (blue) and deletions (red) was calculated at both the population level (row 1) and the individuals level (row 4). The distributions were also compared against validation results, random simulations (see Methods), HuRef, YanHuang, and the human reference genome (deletions only). c. The counts of CCC vs NCCC distribution in insertions and deletions.