Table 1 Genic siRNAs and piRNAs associated with the core components of the small RNA silencing pathways in An. gambiae
Small RNA pathway | siRNAs | piRNAs | ||
|---|---|---|---|---|
21-nt read number | 24-30-nt read number | |||
siRNA | Loqs-2 | AGAP009781 | 0 | 0 |
R2D2 | AGAP009887 | 2 | 3 | |
Dcr-2 | AGAP012289 | 3 | 8 | |
Ago-2 | AGAP011537 | 84 | 251 | |
piRNA | Ago-3 | AGAP008862 | 0 | 18 |
Aub-PIWI2 | AGAP009509 | 2 | 61 | |
Aub-PIWI1 | AGAP011204 | 9 | 93 | |
Zucchini | AGAP006233 | 1 | 0 | |
Armitage | AGAP006939 | 12 | 44 | |
Tudor | AGAP005672 | 20 | 391 | |
Vreteno | AGAP010722 | 1 | 0 | |
Shutdown | AGAP011458 | 0 | 19 | |
Pimet/HEN1 | AGAP005646 | 0 | 15 | |
tj | AGAP010030 | 1 | 8 | |
mael | AGAP002022 | 2 | 3 | |
spnE | AGAP002829 | 11 | 9 | |
Rm62 (DDX-17) | AGAP003663 | 29 | 773 | |
AGAP004912 | 1 | 6 | ||
AGAP005652 | 7 | 93 | ||
AGAP012045 | 14 | 104 | ||
miRNA | Dcr-1 | AGAP002836 | 1 | 5 |
Drosha | AGAP008087 | 0 | 0 | |
Pasha | AGAP002554 | 1 | 2 | |
Ago-1 | AGAP011717 | 122 | 412 |