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Table 1 Relative expression stabilities of seven candidate reference genes from prokaryotic cells according to Bestkeeper, NormFinder, and GeNorm

From: Dual 3’Seq using deepSuperSAGE uncovers transcriptomes of interacting Salmonella enterica Typhimurium and human host cells

Evaluation method

Candidate reference gene stability*

Bestkeeper

trmA , nagD , ndh , rpoD , ygfE, rpsO, rpsT

NormFinder

rpoD , ndh , nagD , trmA , ygfE, rpsO, rpsT

GeNorm

trmA / nagD , ndh , rpoD , ygfE, rpsO, rpsT

  1. *Gene stability decreasing from left to right; the employed reference genes for quantification of the time-dependent expression from prokaryotic transcripts are indicated by bold letters.
  2. Please consult the text for more information.
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BMC Genomics

ISSN: 1471-2164

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