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Table 2 13 cliques of size 10 with 1-to-1 orthologs in all 10 plant species

From: Enrichment of Triticum aestivum gene annotations using ortholog cliques and gene ontologies in other plants

Clique

ATA

ATH

BDI

BRA

HVU

OSA

SBI

TAE

TUR

ZMA

1

F775_06552

AT3G44600

BRADI3G42750

BRA019430

MLOC_38535

OS08G0557500

SB07G024330

TRAES_7DS_8020BEEC2

TRIUR3_22015

GRMZM2G049525

2

F775_11186

AT1G30010

BRADI1G39140

BRA032352

MLOC_55696

OS12G0407300

SB01G044780

TRAES_7DL_659883F3D

TRIUR3_27785

GRMZM2G023983

3

F775_08951

AT2G47910

BRADI3G16010

BRA021447

MLOC_8265

OS08G0167500

SB02G024420

TRAES_6AS_87906149C

TRIUR3_09163

GRMZM2G106164

4

F775_06961

AT3G13220

BRADI1G36410

BRA039378

MLOC_66857

OS06G0607700

SB10G023750

TRAES_7DL_439CC6EA0

TRIUR3_24106

GRMZM2G076526

5

F775_11259

AT2G21070

BRADI3G01970

BRA030323

MLOC_14151

OS02G0121200

SB04G001730

TRAES_6AS_AD173C5A3

TRIUR3_05931

GRMZM2G090156

6

F775_11739

AT2G40760

BRADI2G44260

BRA016973

MLOC_63819

OS05G0323100

SB09G011890

TRAES_6AS_FD8F6B539

TRIUR3_17179

GRMZM2G087671

7

F775_31011

AT3G55360

BRADI2G03297

BRA007154

MLOC_59964

OS01G0150000

SB03G006070

TRAES_3B_90F2B79E9

TRIUR3_25686

GRMZM2G481843

8

F775_27767

AT3G55760

BRADI4G15010

BRA023783

MLOC_9792

OS11G0586300

SB05G022830

TRAES_4BS_2159A428F

TRIUR3_31794

GRMZM2G069092

9

F775_13173

AT5G06550

BRADI4G16020

BRA009205

MLOC_65909

OS11G0572800

SB05G022250

TRAES_7DL_96FFFB41E

TRIUR3_19243

GRMZM2G078198

10

F775_13768

AT1G63660

BRADI3G20590

BRA027795

MLOC_34318

OS08G0326600

SB06G033930

TRAES_6AS_E6DEE586C

TRIUR3_04203

GRMZM2G136283

11

F775_08440

AT4G35870

BRADI1G75920

BRA010507

MLOC_68300

OS03G0137400

SB01G047810

TRAES_4DL_11B05CF85

TRIUR3_30140

GRMZM2G059891

12

F775_30997

AT4G35250

BRADI3G42580

BRA020809

MLOC_3618

OS08G0553800

SB07G024590

TRAES_7DS_E3B38CA36

TRIUR3_18085

GRMZM2G143917

13

F775_08503

AT1G03190

BRADI2G36360

BRA030524

MLOC_66388

OS05G0144800

SB09G003450

TRAES_1AS_A25EED9EA

TRIUR3_25030

GRMZM2G097605

  1. The 1-to-1 orthologs included in these cliques are RBBHs predicted using as input both DNA and protein sequences. ATA = A egilops ta uschii, ATH = A rabidopsis th aliana, BDI = B rachypodium di stachion, BRA = B rassica ra pa, HVU = H ordeum vu lgare, OSA = O ryza sa tiva, SBI = S orghum bi color, TAE = T riticum ae stivum, TUR = T riticum ur artu, ZMA = Z ea ma ys.
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BMC Genomics

ISSN: 1471-2164

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