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Fig. 2 | BMC Genomics

Fig. 2

From: Genome-wide transcriptomic analysis of a superior biomass-degrading strain of A. fumigatus revealed active lignocellulose-degrading genes

Fig. 2

Comparison of relative gene numbers in each COG. The ratios of gene counts in A. fumigatus Z5 (AF), A. niger (AN), A. nidulans (ANS), A. oryzae (AO), N. crassa (NC) and T. reesei (TR) to gene counts in S. cerevisiae (SC) in each COG category were calculated. COGs with a gene number ≤5 for each species (Y, N and W) are not displayed to avoid misinterpretation resulted from potentially low reliability. J, Translation, ribosomal structure and biogenesis; A, RNA processing and modification; K, Transcription; L, Replication, recombination and repair; B, Chromatin structure and dynamics; D, Cell cycle control, cell division, chromosome partitioning; Y, Nuclear structure; V, Defense mechanisms; T, Signal transduction mechanisms; M, Cell wall/membrane/envelope biogenesis; N, Cell motility; Z, Cytoskeleton; W, Extracellular structures; U, Intracellular trafficking, secretion, and vesicular transport; O, Posttranslational modification, protein turnover, chaperones; C, Energy production and conversion; G, Carbohydrate transport and metabolism; E, Amino acid transport and metabolism; F, Nucleotide transport and metabolism; H, Coenzyme transport and metabolism;I, Lipid transport and metabolism; P, Inorganic ion transport and metabolism; Q, Secondary metabolites biosynthesis, transport and catabolism; R, General function prediction only; S, Function unknown

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